RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PLA1AQ53H76 456 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 TMEM244Q5VVB8 128 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 OR52W1Q6IF63 320 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 UTS2BQ765I0 119 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 C16orf82Q7Z2V1 217 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 KCTD20Q7Z5Y7 419 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 TMEM219Q86XT9 240 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 OR10H4Q8NGA5 316 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 BCAS4Q8TDM0 211 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 R3HDM4Q96D70 268 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 TBX5Q99593 518 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 CLEC7AQ9BXN2 247 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 TMEM133Q9H2Q1 129 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 ZNF281Q9Y2X9 895 aa12.06□□□□□ -0.48
RNF40-209ENST00000566703 UBE2J1Q9Y385 318 aaPredicted RBP12.06□□□□□ -0.48
RNF40-209ENST00000566703 IGHV2-26A0A0B4J1V2 119 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 TRBV2A0A0J9YWF9 115 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 F2RL2O00254 374 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 GABRR1P24046 479 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 HTR1DP28221 377 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 ISL1P61371 349 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 BLCAPP62952 87 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 IL18R1Q13478 541 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 EDDM3AQ14507 147 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 SPIN3Q5JUX0 258 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 HIST2H2BDQ6DRA6 164 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 Q6ZPA2 131 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 RTN4RL2Q86UN3 420 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 FAM58AQ8N1B3 248 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 PRSS35Q8N3Z0 413 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 ZNF676Q8N7Q3 588 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 WFDC9Q8NEX5 89 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 OR52N4Q8NGI2 321 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 CIB1Q99828 191 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 CITED2Q99967 270 aaPredicted RBP12.05□□□□□ -0.48
RNF40-209ENST00000566703 OSBPL10Q9BXB5 764 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 MMP28Q9H239 520 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 HILPDAQ9Y5L2 63 aa12.05□□□□□ -0.48
RNF40-209ENST00000566703 PLXNB1O43157 2135 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 FUOMA2VDF0 154 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 ADARB2-AS1A8MUL3 147 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 PSPNO60542 156 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 IGHA1P01876 353 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 ISG15P05161 165 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 ATF1P18846 271 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 POLR2IP36954 125 aaKnown RBP12.04□□□□□ -0.48
RNF40-209ENST00000566703 NPBWR2P48146 333 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 RASSF2P50749 326 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 MTCP1P56278 107 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 CD83Q01151 205 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 SLC34A1Q06495 639 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 BNIP1Q12981 228 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 OXLD1Q5BKU9 147 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 FDX2Q6P4F2 183 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 LHFPL2Q6ZUX7 228 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 FAM220AQ7Z4H9 259 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 AMIGO2Q86SJ2 522 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 LYG1Q8N1E2 194 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 OR2G2Q8NGZ5 317 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 NDNFQ8TB73 568 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 TRUB1Q8WWH5 349 aaKnown RBP12.04□□□□□ -0.48
RNF40-209ENST00000566703 CORO2AQ92828 525 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 EME1Q96AY2 570 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 SPSB1Q96BD6 273 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 OCSTAMPQ9BR26 566 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 GABARAPL3Q9BY60 117 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 RHOFQ9HBH0 211 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 NECAP2Q9NVZ3 263 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 TAS2R3Q9NYW6 316 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.04□□□□□ -0.48
RNF40-209ENST00000566703 DPM3Q9P2X0 92 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 CMYA5Q8N3K9 4069 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 TGP01266 2768 aa12.04□□□□□ -0.48
RNF40-209ENST00000566703 IGKV1-9A0A0C4DH69 117 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 LOC107986453A0A1B0GWG9 222 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 MEX3AA1L020 520 aaKnown RBP12.03□□□□□ -0.48
RNF40-209ENST00000566703 H3BSH0 61 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 SH2D1BO14796 132 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 PIN1P1O15428 100 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 ENTPD6O75354 484 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 INMTO95050 263 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 LMO1P25800 156 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 BRS3P32247 399 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 VDAC2P45880 294 aaPredicted RBP12.03□□□□□ -0.48
RNF40-209ENST00000566703 P2RX3P56373 397 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 LOXL3P58215 753 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 BDH1Q02338 343 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 ZNF85Q03923 595 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 PDZK1IP1Q13113 114 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 ARSJQ5FYB0 599 aaPredicted RBP12.03□□□□□ -0.48
RNF40-209ENST00000566703 Q6ZS46 218 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 RDH10Q8IZV5 341 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 ZNF596Q8TC21 504 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 RNF166Q96A37 237 aaPredicted RBP12.03□□□□□ -0.48
RNF40-209ENST00000566703 ADAT3Q96EY9 351 aaPredicted RBP12.03□□□□□ -0.48
RNF40-209ENST00000566703 AKR1E2Q96JD6 320 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 LIN7BQ9HAP6 207 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 HMG20AQ9NP66 347 aa12.03□□□□□ -0.48
RNF40-209ENST00000566703 RBFOX1Q9NWB1 397 aaKnown RBP12.03□□□□□ -0.48
RNF40-209ENST00000566703 TRGV10A0A0A0MS01 117 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms