RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 OPN1MW2P0DN77 364 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 OPN1MW3P0DN78 364 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 PIPP12273 146 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 ATF1P18846 271 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 MTCP1P56278 107 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 SNRPGP62308 76 aaKnown RBP9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 OR52W1Q6IF63 320 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 ZNF782Q6ZMW2 699 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 LHFPL4Q7Z7J7 247 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 FAM58AQ8N1B3 248 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 EMG1Q92979 244 aaKnown RBP9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 SPSB1Q96BD6 273 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 HRASLS5Q96KN8 279 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 MBOAT4Q96T53 435 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 PRSS22Q9GZN4 317 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 IMPAD1Q9NX62 359 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 UBE2J1Q9Y385 318 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 PCDHGB5Q9Y5G0 923 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 SESN1Q9Y6P5 492 aa9.85□□□□□ -0.83
GTF3C1-204ENST00000564664 LOC107986453A0A1B0GWG9 222 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 DAPL1A0PJW8 107 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 TMEM82A0PJX8 343 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 A6NDX4 124 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 SH2D1BO14796 132 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 SLC16A6O15403 523 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 ALX3O95076 343 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 ALDOBP05062 364 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 ZNF20P17024 532 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 GABRR1P24046 479 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 AZGP1P25311 298 aaKnown RBP9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 LMO1P25800 156 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 KIR3DL2P43630 455 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 ZNF91Q05481 1191 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 PDZK1IP1Q13113 114 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 IL18R1Q13478 541 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 GRK1Q15835 563 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 FAM189A2Q15884 450 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 SSX2Q16385 188 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 TP53I3Q53FA7 332 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 RTN4RL2Q86UN3 420 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 SAXO1Q8IYX7 474 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 RDH10Q8IZV5 341 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 BATF2Q8N1L9 274 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 KLHDC1Q8N7A1 406 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 CORO2AQ92828 525 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 RNF166Q96A37 237 aaPredicted RBP9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 FGGYQ96C11 551 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 FRRS1LQ9P0K9 344 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 HHLA2Q9UM44 414 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 SIGLEC9Q9Y336 463 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 DSCAML1Q8TD84 2053 aa9.84□□□□□ -0.83
GTF3C1-204ENST00000564664 IGKV1-9A0A0C4DH69 117 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 MEGF11A6BM72 1044 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 FAM90A22PA8MWA6 464 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 CHST1O43916 411 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 ENTPD6O75354 484 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 APOL3O95236 402 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 ALPLP05186 524 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 HTR1AP08908 422 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 OCM2P0CE71 109 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 OCMP0CE72 109 aaPredicted RBP9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 VSIG10L2P0DP72 767 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 ACTA2P62736 377 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 ACTG2P63267 376 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 MRPL28Q13084 256 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 DYNC1I2Q13409 638 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 ZFP1Q6P2D0 407 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 CCBE1Q6UXH8 406 aaPredicted RBP9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 C16orf82Q7Z2V1 217 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 ACBD7Q8N6N7 88 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 ZNF676Q8N7Q3 588 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 CHST4Q8NCG5 386 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 HAVCR2Q8TDQ0 301 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 CREB3L1Q96BA8 519 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 RNFT2Q96EX2 444 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 ADAT3Q96EY9 351 aaPredicted RBP9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 OPALINQ96PE5 141 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 CLEC7AQ9BXN2 247 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 TMEM133Q9H2Q1 129 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 GAL3ST2Q9H3Q3 398 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 ZNF702PQ9H963 129 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 HMG20AQ9NP66 347 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 TAS2R3Q9NYW6 316 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 FOXJ3Q9UPW0 622 aa9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 EXOGQ9Y2C4 368 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-204ENST00000564664 TRGV10A0A0A0MS01 117 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 IGHV2-26A0A0B4J1V2 119 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 SAC3D1A6NKF1 404 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 E9PQ18 207 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 XPNPEP2O43895 674 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 MPZL2O60487 215 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 PSPNO60542 156 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 FBXO24O75426 580 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 IGHA1P01876 353 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 PRKACAP17612 351 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 BCL3P20749 454 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 PAX6P26367 422 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 HTR1DP28221 377 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 NPBWR2P48146 333 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 RAB13P51153 203 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms