RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 TMEM242Q9NWH2 141 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 THAP10Q9P2Z0 257 aaPredicted RBP10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 PCNX3Q9H6A9 2034 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 A0A1W2PPQ1 181 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 PHF1O43189 567 aaPredicted RBP10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 SSSCA1O60232 199 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 ZNF728P0DKX0 622 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 CD33P20138 364 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 IL11P20809 199 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 GPR3P46089 330 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 PNRC1Q12796 327 aaPredicted RBP10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 SMAD4Q13485 552 aaKnown RBP10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 RTL6Q6ICC9 239 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 OR11L1Q8NGX0 322 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 ADAMTS18Q8TE60 1221 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 TSLPQ969D9 159 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 ZNF665Q9H7R5 613 aa10.8□□□□□ -0.68
SCAMP2-204ENST00000563829 LOC102723971A0A1B0GUV8 181 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 H0YIG0 161 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 M0QZK8 103 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 GGCTO75223 188 aaKnown RBP10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 ANOS1P23352 680 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 MSX1P28360 303 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 FGF8P55075 233 aaPredicted RBP10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 ZFP36L1Q07352 338 aaKnown RBP10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 KIR2DS3Q14952 304 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 FNDC7Q5VTL7 733 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 LCN15Q6UWW0 184 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 WDFY1Q8IWB7 410 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 NEK7Q8TDX7 302 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 RNF133Q8WVZ7 376 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 PCGF1Q9BSM1 259 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 SDF2L1Q9HCN8 221 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 PLEKHJ1Q9NW61 149 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 MED29Q9NX70 200 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 HPRT1P00492 218 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 CRYABP02511 175 aaKnown RBP10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 GZMHP20718 246 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 VIPR2P41587 438 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 DYNLT3P51808 116 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 OR8G5Q8NG78 346 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 SLC17A4Q9Y2C5 497 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 PHF3Q92576 2039 aaKnown RBP10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 SHANK1Q9Y566 2161 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 ARHGEF17Q96PE2 2063 aaPredicted RBP10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 GUSBP08236 651 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 LIAT1Q6ZQX7 453 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 C16orf82Q7Z2V1 217 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 IL22RA1Q8N6P7 574 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 ZNF248Q8NDW4 579 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 DNASE2BQ8WZ79 361 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 SDSLQ96GA7 329 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 ZNF385AQ96PM9 386 aaKnown RBP10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 CHST11Q9NPF2 352 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 POLR1DQ9Y2S0 133 aa10.79□□□□□ -0.68
SCAMP2-204ENST00000563829 HBE1P02100 147 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 CEACAM1P13688 526 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 PPP1CAP62136 330 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 ZNF321PQ8N8H1 164 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 TBX15Q96SF7 602 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 EMC6Q9BV81 110 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 GLRX2Q9NS18 164 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 NAGKQ9UJ70 344 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 THSD7BQ9C0I4 1608 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 PLPP3O14495 311 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 HLA-HP01893 362 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 BRS3P32247 399 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 TNFSF10P50591 281 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 HSF1Q00613 529 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 ETFRF1Q6IPR1 90 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 SLC25A24Q6NUK1 477 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 LILRA6Q6PI73 481 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 PATE1Q8WXA2 126 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 NXF5Q9H1B4 397 aaKnown RBP10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 PRTFDC1Q9NRG1 225 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 SLC2A9Q9NRM0 540 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 P4HTMQ9NXG6 502 aa10.78□□□□□ -0.68
SCAMP2-204ENST00000563829 SPEGQ15772 3267 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 A0A1B0GUS0 222 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 NKX2-6A6NCS4 301 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 TNFSF14O43557 240 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 PITX3O75364 302 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 ECI1P42126 302 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 MRPS34P82930 218 aaKnown RBP10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 RTP5Q14D33 572 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 COA6Q5JTJ3 125 aaKnown RBP10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 CST9LP1Q5W188 147 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 PSRC1Q6PGN9 363 aaPredicted RBP10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 DEGS2Q6QHC5 323 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 TMEM252Q8N6L7 170 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 C11orf40Q8WZ69 217 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 TSACCQ96A04 125 aaPredicted RBP10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 C18orf12Q96KH6 178 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 ZNF319Q9P2F9 582 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 ANXA10Q9UJ72 324 aa10.77□□□□□ -0.68
SCAMP2-204ENST00000563829 PRR19A6NJB7 356 aa10.77□□□□□ -0.69
SCAMP2-204ENST00000563829 CEBPZOSA8MTT3 80 aa10.77□□□□□ -0.69
SCAMP2-204ENST00000563829 PROB1E7EW31 1015 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 209.2 ms