RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 DUSP21Q9H596 190 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 PAK1IP1Q9NWT1 392 aaPredicted RBP13.64□□□□□ -0.23
CDT1-202ENST00000562747 TAS2R4Q9NYW5 299 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 ZNF69Q9UC07 566 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 KDM4BO94953 1096 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 INMTO95050 263 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 ALDOBP05062 364 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 SFTPBP07988 381 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 CELP19835 753 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 NPBWR2P48146 333 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 ZP1P60852 638 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 RPS11P62280 158 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDT1-202ENST00000562747 PPP3R1P63098 170 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 Q499Y3 187 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 SPIN3Q5JUX0 258 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 GPR157Q5UAW9 335 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 ASPHD2Q6ICH7 369 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 FAM58AQ8N1B3 248 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 CNBD2Q96M20 576 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 RBFOX1Q9NWB1 397 aaKnown RBP13.63□□□□□ -0.23
CDT1-202ENST00000562747 ONECUT1Q9UBC0 465 aa13.63□□□□□ -0.23
CDT1-202ENST00000562747 IGKV1-12A0A0C4DH73 117 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 A0A1W2PQ09 198 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 K7N7A8 449 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 ANGPTL7O43827 346 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 IGKV1D-12P01611 117 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 TK1P04183 234 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 CRHBPP24387 322 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 COL10A1Q03692 680 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 IRF3Q14653 427 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 ZNF146Q15072 292 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 C1orf122Q6ZSJ8 110 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 RNF144BQ7Z419 303 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 OR51A2Q8NGJ7 313 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 OR5D18Q8NGL1 313 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 OR13C5Q8NGS8 318 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 THRSPQ92748 146 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 ZNF747Q9BV97 191 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 ELL3Q9HB65 397 aaPredicted RBP13.62□□□□□ -0.23
CDT1-202ENST00000562747 HMG20AQ9NP66 347 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 TMEM138Q9NPI0 162 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 GLS2Q9UI32 602 aa13.62□□□□□ -0.23
CDT1-202ENST00000562747 IGHV3OR16-10A0A075B7F0 116 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 PNMA8CA0A1B0GUJ8 204 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 M0R1W7 72 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 RGS10O43665 173 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 ZNF737O75373 536 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 GPX5O75715 221 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 HAND1O96004 215 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 TMEM225BP0DP42 221 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 PRKACAP17612 351 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 FSTP19883 344 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 DOC2BQ14184 412 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 SPHARQ15513 63 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 RBM48Q5RL73 367 aaKnown RBP13.61□□□□□ -0.23
CDT1-202ENST00000562747 METAP1DQ6UB28 335 aaPredicted RBP13.61□□□□□ -0.23
CDT1-202ENST00000562747 VMO1Q7Z5L0 202 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 BCL6BQ8N143 479 aaPredicted RBP13.61□□□□□ -0.23
CDT1-202ENST00000562747 ASCC1Q8N9N2 400 aaKnown RBP13.61□□□□□ -0.23
CDT1-202ENST00000562747 PXT1Q8NFP0 134 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 OR5D13Q8NGL4 314 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 TBC1D15Q8TC07 691 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 SGCDQ92629 289 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 SNX22Q96L94 193 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 GPER1Q99527 375 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 CKLFQ9UBR5 152 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 BLOC1S6Q9UL45 172 aa13.61□□□□□ -0.23
CDT1-202ENST00000562747 LSM2Q9Y333 95 aaKnown RBP13.61□□□□□ -0.23
CDT1-202ENST00000562747 RRP15Q9Y3B9 282 aaKnown RBP13.61□□□□□ -0.23
CDT1-202ENST00000562747 TRBV5-7A0A0A0MS05 114 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 CENPVL3A0A0U1RRI6 287 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 A0A1W2PPH5 198 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 TGP01266 2768 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 IGFBP3P17936 291 aaPredicted RBP13.6□□□□□ -0.23
CDT1-202ENST00000562747 BDKRB2P30411 391 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 BMXP51813 675 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 RPL31P62899 125 aaKnown RBP13.6□□□□□ -0.23
CDT1-202ENST00000562747 BLMHQ13867 455 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 RBMS3Q6XE24 437 aaKnown RBP13.6□□□□□ -0.23
CDT1-202ENST00000562747 PRSS48Q7RTY5 328 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 SATL1Q86VE3 508 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 FAM185AQ8N0U4 392 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 Q8N7P7 452 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 SIGLECL1Q8N7X8 197 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 OR52N4Q8NGI2 321 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 LHX4Q969G2 390 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 C1orf147Q96MC9 270 aaPredicted RBP13.6□□□□□ -0.23
CDT1-202ENST00000562747 DUX5Q96PT3 197 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 OR14A2Q96R54 314 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 OR5M11Q96RB7 305 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 ZNF184Q99676 751 aaPredicted RBP13.6□□□□□ -0.23
CDT1-202ENST00000562747 ZNF696Q9H7X3 374 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 IL36RNQ9UBH0 155 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 CMYA5Q8N3K9 4069 aa13.6□□□□□ -0.23
CDT1-202ENST00000562747 GABRPO00591 440 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 SH2D1BO14796 132 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 HKR1P10072 659 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 MAPK3P27361 379 aaPredicted RBP13.59□□□□□ -0.23
CDT1-202ENST00000562747 GPR50Q13585 617 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 MED22Q15528 200 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms