RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 ARHGAP5-AS1Q96IT6 56 aa6.4□□□□□ -1.38
TPM1-231ENST00000561395 MICU1Q9BPX6 476 aa6.4□□□□□ -1.38
TPM1-231ENST00000561395 ADAT1Q9BUB4 502 aaKnown RBP6.4□□□□□ -1.38
TPM1-231ENST00000561395 RTL8AQ9BWD3 113 aa6.4□□□□□ -1.38
TPM1-231ENST00000561395 MMP28Q9H239 520 aa6.4□□□□□ -1.38
TPM1-231ENST00000561395 CLEC4MQ9H2X3 399 aaPredicted RBP6.4□□□□□ -1.38
TPM1-231ENST00000561395 ZMAT3Q9HA38 289 aaKnown RBP6.4□□□□□ -1.38
TPM1-231ENST00000561395 HRASLSQ9HDD0 168 aa6.4□□□□□ -1.38
TPM1-231ENST00000561395 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.4□□□□□ -1.38
TPM1-231ENST00000561395 PCDHB16Q9NRJ7 776 aa6.4□□□□□ -1.38
TPM1-231ENST00000561395 TAS2R8Q9NYW2 309 aa6.4□□□□□ -1.38
TPM1-231ENST00000561395 ZNF107Q9UII5 783 aaPredicted RBP6.4□□□□□ -1.38
TPM1-231ENST00000561395 PURGQ9UJV8 347 aaKnown RBP6.4□□□□□ -1.38
TPM1-231ENST00000561395 ELF5Q9UKW6 265 aaPredicted RBP6.4□□□□□ -1.38
TPM1-231ENST00000561395 A0A1B0GWJ7 208 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 LRP5LA4QPB2 252 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 MEIS3P1A6NDR6 274 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 INAFM1C9JVW0 142 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 AKR7A2O43488 359 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 TIMM8AO60220 97 aaPredicted RBP6.39□□□□□ -1.39
TPM1-231ENST00000561395 SSX5O60225 188 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 PFDN1O60925 122 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 CA11O75493 328 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 CRYAAP02489 173 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 SFTPBP07988 381 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 AKAIN1P0CW23 69 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 GABRR1P24046 479 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 GIFP27352 417 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 BLVRBP30043 206 aaPredicted RBP6.39□□□□□ -1.39
TPM1-231ENST00000561395 GCH1P30793 250 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 FAUP35544 74 aaKnown RBP6.39□□□□□ -1.39
TPM1-231ENST00000561395 HAAOP46952 286 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 RBM11P57052 281 aaKnown RBP6.39□□□□□ -1.39
TPM1-231ENST00000561395 GNG2P59768 71 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 NKX6-1P78426 367 aaPredicted RBP6.39□□□□□ -1.39
TPM1-231ENST00000561395 IL24Q13007 206 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 SNTB2Q13425 540 aaKnown RBP6.39□□□□□ -1.39
TPM1-231ENST00000561395 ARL6IP1Q15041 203 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 OR8G1Q15617 311 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 DEFB113Q30KQ7 82 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 PIGYQ3MUY2 71 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 RSBN1Q5VWQ0 802 aaPredicted RBP6.39□□□□□ -1.39
TPM1-231ENST00000561395 ELP2Q6IA86 826 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 C22orf34Q6ZV56 151 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 TRAPPC6BQ86SZ2 158 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 ZNF573Q86YE8 665 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 KRTAP1-3Q8IUG1 177 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 MKXQ8IYA7 352 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 FBXL14Q8N1E6 418 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 TMEM229BQ8NBD8 167 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 OR8G5Q8NG78 346 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 OR4C16Q8NGL9 310 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 OR8S1Q8NH09 359 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 NUDCD2Q8WVJ2 157 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 ST8SIA4Q92187 359 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 SLAMF9Q96A28 289 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 CREB3L1Q96BA8 519 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 MARVELD1Q9BSK0 173 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 PECRQ9BY49 303 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 PKIBQ9C010 78 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 OR51I2Q9H344 312 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 DPAGT1Q9H3H5 408 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 HEATR1Q9H583 2144 aaKnown RBP6.39□□□□□ -1.39
TPM1-231ENST00000561395 COPZ2Q9P299 210 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 FZR1Q9UM11 496 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 ANAPC10Q9UM13 185 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 KCNK7Q9Y2U2 307 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 SPEF1Q9Y4P9 236 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 NUBP2Q9Y5Y2 271 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 CUBNO60494 3623 aa6.39□□□□□ -1.39
TPM1-231ENST00000561395 A0A0B4J293 547 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A10PA6NDY2 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A18PA6NE21 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A16PA6NEW6 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A20PA6NIJ5 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A8PA6NJQ4 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A7PA6NKC0 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 TMEM210A6NLX4 147 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 RNF212BA8MTL3 300 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 SERPINE3A8MV23 424 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A22PA8MWA6 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A12PA8MX19 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A5PA8MXJ8 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A23PA8MXZ1 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 ATP6V1G2-DDX39BF2Z307 99 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 TRAPPC2LH3BP13 241 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 J3QT63 122 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 ST8SIA5O15466 376 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 MLNRO43193 412 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 SYNGR1O43759 233 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 CYB5AP00167 134 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 CD3DP04234 171 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 THBDP07204 575 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A15PP0C7V4 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A13PP0C7W8 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A14PP0C7W9 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 FAM90A24PP0C7X0 464 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 ZNF250P15622 560 aa6.38□□□□□ -1.39
TPM1-231ENST00000561395 PPP3CBP16298 524 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms