RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 DHRS3O75911 302 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 NXPH2O95156 264 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 ALDOBP05062 364 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 ZNF728P0DKX0 622 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 CD33P20138 364 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 CEBPDP49716 269 aaPredicted RBP9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 CDC42P60953 191 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 BLCAPP62952 87 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 CDK5Q00535 292 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 CD83Q01151 205 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 ROM1Q03395 351 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 PLA1AQ53H76 456 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 LDLRAD2Q5SZI1 272 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 TMEM42Q69YG0 159 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 COMMD2Q86X83 199 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 TMEM219Q86XT9 240 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 OR51E1Q8TCB6 317 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 FCGR1BQ92637 280 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 TEAD3Q99594 435 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 BCL7BQ9BQE9 202 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 DUSP21Q9H596 190 aa9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 NUFIP1Q9UHK0 495 aaKnown RBP9.52□□□□□ -0.89
CARMIL3-204ENST00000561354 PQLC2LA1A4F0 135 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 PSMD9O00233 223 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 PIPP12273 146 aaPredicted RBP9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 OSMP13725 252 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 MPZP25189 248 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 DCKP27707 260 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 POLR2IP36954 125 aaKnown RBP9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 HCCSP53701 268 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 ERVK11-1P61568 191 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 RPS7P62081 194 aaKnown RBP9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 SLC35A2P78381 396 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 ZNF829Q3KNS6 432 aaPredicted RBP9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 CLVS2Q5SYC1 327 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 Q6ZS46 218 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 ZNF679Q8IYX0 411 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 SPARTQ8N0X7 666 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 BBS1Q8NFJ9 593 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 ASB17Q8WXJ9 295 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 OR5M11Q96RB7 305 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 OCSTAMPQ9BR26 566 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 IMPAD1Q9NX62 359 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 OR14J1Q9UGF5 321 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 TMEM14AQ9Y6G1 99 aa9.51□□□□□ -0.89
CARMIL3-204ENST00000561354 ZAR1LA6NP61 321 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 FAM90A22PA8MWA6 464 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 H3BUI4 141 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 RGS10O43665 173 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 ZNF737O75373 536 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 MPIG6BO95866 241 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 TTRP02766 147 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 CHRM2P08172 466 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 IGHV1-8P0DP01 117 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 IGLL1P15814 213 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 AZGP1P25311 298 aaKnown RBP9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 VDAC2P45880 294 aaPredicted RBP9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 CRISP1P54107 249 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 TMBIM6P55061 237 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 OR12D2P58182 307 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 ARSJQ5FYB0 599 aaPredicted RBP9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 MINOS1Q5TGZ0 78 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 LAIR2Q6ISS4 152 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 PRSS48Q7RTY5 328 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 ENTHD1Q8IYW4 607 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 BPIFB6Q8NFQ5 453 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 OR5AU1Q8NGC0 362 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 OR13F1Q8NGS4 319 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 RHOXF1Q8NHV9 184 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 CNIH3Q8TBE1 160 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 TRUB1Q8WWH5 349 aaKnown RBP9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 MYDGFQ969H8 173 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 MUL1Q969V5 352 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 Q96MT0 163 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 TEX12Q9BXU0 123 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 PRRG3Q9BZD7 231 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 PKIBQ9C010 78 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 SLC22A13Q9Y226 551 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 MINOS1-NBL1R4GNA1 71 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 V9GYS6 101 aa9.5□□□□□ -0.89
CARMIL3-204ENST00000561354 DHRS7CA6NNS2 312 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 PRR32B1ATL7 298 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 K7EIL1 84 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 F2RL2O00254 374 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 SRSF10O75494 262 aaKnown RBP9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 DUS4LO95620 317 aaKnown RBP9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 PF4V1P10720 104 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 RIDAP52758 137 aaKnown RBP9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 COL10A1Q03692 680 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 MEF2CQ06413 473 aaPredicted RBP9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 MFGE8Q08431 387 aaPredicted RBP9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 IL24Q13007 206 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 DYNC1I2Q13409 638 aaKnown RBP9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 NEDD8Q15843 81 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 SLX4IPQ5VYV7 408 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 XAF1Q6GPH4 301 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 Q6ZSR3 168 aa9.49□□□□□ -0.89
CARMIL3-204ENST00000561354 GDPD3Q7L5L3 318 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms