RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 OR2G2Q8NGZ5 317 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 ABCB10Q9NRK6 738 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 SERTAD4Q9NUC0 356 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 RBFOX1Q9NWB1 397 aaKnown RBP13.08□□□□□ -0.31
SNX1-213ENST00000561026 LINC00312Q9Y6C7 94 aa13.08□□□□□ -0.31
SNX1-213ENST00000561026 SAC3D1A6NKF1 404 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 PSPNO60542 156 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 CYB5AP00167 134 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 ISG15P05161 165 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 PRKACBP22694 351 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 GABRR1P24046 479 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 PEX2P28328 305 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 DUSP1P28562 367 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 DYNLT3P51808 116 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 MTCP1P56278 107 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 OR12D2P58182 307 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 ACTA2P62736 377 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 ACTG2P63267 376 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 ACTC1P68032 377 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 ACTA1P68133 377 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 ZNF91Q05481 1191 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 ZNF146Q15072 292 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 GRK1Q15835 563 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 FDX2Q6P4F2 183 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 UTS2BQ765I0 119 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 TMEM219Q86XT9 240 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 FAM58AQ8N1B3 248 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 TPRX1Q8N7U7 411 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 FGGYQ96C11 551 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 CHST6Q9GZX3 395 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 IMPAD1Q9NX62 359 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 FRRS1LQ9P0K9 344 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 PITPNC1Q9UKF7 332 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 DSCAML1Q8TD84 2053 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 J3QRE1 110 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 ENTPD6O75354 484 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 ATF1P18846 271 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 BCL3P20749 454 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 POU3F4P49335 361 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 HABP2Q14520 560 aaPredicted RBP13.07□□□□□ -0.32
SNX1-213ENST00000561026 SLC25A30Q5SVS4 291 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 MINOS1Q5TGZ0 78 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 ZNF676Q8N7Q3 588 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 OR4S1Q8NGB4 309 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 HRASLS5Q96KN8 279 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 SESN1Q9Y6P5 492 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 MINOS1-NBL1R4GNA1 71 aa13.07□□□□□ -0.32
SNX1-213ENST00000561026 NOTCH3Q9UM47 2321 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 IGHV2-26A0A0B4J1V2 119 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 DAPL1A0PJW8 107 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 G3V4G9 280 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 MGST3O14880 152 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 SLC16A6O15403 523 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 CIB2O75838 187 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 ALPLP05186 524 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 CALCBP10092 127 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 ZNF20P17024 532 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 AZGP1P25311 298 aaKnown RBP13.06□□□□□ -0.32
SNX1-213ENST00000561026 ERP29P30040 261 aaKnown RBP13.06□□□□□ -0.32
SNX1-213ENST00000561026 NANOS3P60323 173 aaKnown RBP13.06□□□□□ -0.32
SNX1-213ENST00000561026 PDZK1IP1Q13113 114 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 SPIN3Q5JUX0 258 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 LHFPL2Q6ZUX7 228 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 SPSB1Q96BD6 273 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 RNFT2Q96EX2 444 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 MBOAT4Q96T53 435 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 PRSS22Q9GZN4 317 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 TMEM133Q9H2Q1 129 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 HMG20AQ9NP66 347 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 GLS2Q9UI32 602 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 HILPDAQ9Y5L2 63 aa13.06□□□□□ -0.32
SNX1-213ENST00000561026 FBXO24O75426 580 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 JUNBP17275 347 aaPredicted RBP13.05□□□□□ -0.32
SNX1-213ENST00000561026 PRKACAP17612 351 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 OR3A1P47881 315 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 CCR9P51686 369 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 P2RX3P56373 397 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 SNRPGP62308 76 aaKnown RBP13.05□□□□□ -0.32
SNX1-213ENST00000561026 BEAN1Q3B7T3 259 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 MEDAGQ5VYS4 303 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 ZBTB49Q6ZSB9 765 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 WIPF2Q8TF74 440 aaPredicted RBP13.05□□□□□ -0.32
SNX1-213ENST00000561026 PYDC1Q8WXC3 89 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 OPALINQ96PE5 141 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 CLEC7AQ9BXN2 247 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 HHLA2Q9UM44 414 aa13.05□□□□□ -0.32
SNX1-213ENST00000561026 UBE2J1Q9Y385 318 aaPredicted RBP13.05□□□□□ -0.32
SNX1-213ENST00000561026 IGKV1-12A0A0C4DH73 117 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 FAM90A22PA8MWA6 464 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 E9PQ18 207 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 F2RL2O00254 374 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 SH2D1BO14796 132 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 MMP23AO75900 390 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 IGKV1D-12P01611 117 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 MT-ND2P03891 347 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 CD28P10747 220 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 SNU13P55769 128 aaKnown RBP13.04□□□□□ -0.32
SNX1-213ENST00000561026 BLCAPP62952 87 aa13.04□□□□□ -0.32
SNX1-213ENST00000561026 EMX1Q04741 257 aaPredicted RBP13.04□□□□□ -0.32
SNX1-213ENST00000561026 SLC34A1Q06495 639 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms