RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 HSF4Q9ULV5 492 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 NKX2-6A6NCS4 301 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 A8MWP6 167 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 F5H5K5 113 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 RRP8O43159 456 aaKnown RBP14.38□□□□□ -0.11
TPM1-228ENST00000560975 SSSCA1O60232 199 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 CCL5P13501 91 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 GALNSP34059 522 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 NSDHLQ15738 373 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 LGI3Q8N145 548 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 OR5C1Q8NGR4 320 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 MSI2Q96DH6 328 aaKnown RBP14.38□□□□□ -0.11
TPM1-228ENST00000560975 LYZL4Q96KX0 146 aa14.38□□□□□ -0.11
TPM1-228ENST00000560975 EREGO14944 169 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 GZMBP10144 247 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 CD200P41217 278 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 GFERP55789 205 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 FBXW4P57775 412 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 SNIP1Q8TAD8 396 aaKnown RBP14.37□□□□□ -0.11
TPM1-228ENST00000560975 NECAP2Q9NVZ3 263 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 GNG13Q9P2W3 67 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 TP53TG5Q9Y2B4 290 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 HSPB1P04792 205 aaKnown RBP14.37□□□□□ -0.11
TPM1-228ENST00000560975 EPHA1P21709 976 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 CD81P60033 236 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 ZNF506Q5JVG8 444 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 OR5R1Q8NH85 324 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 TMEM234Q8WY98 164 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 C2orf16Q68DN1 1984 aa14.37□□□□□ -0.11
TPM1-228ENST00000560975 MYOGP15173 224 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 FGF7P21781 194 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 AKT2P31751 481 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 DYNLT3P51808 116 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 PRSS12P56730 875 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 FOXF1Q12946 379 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 SHISA6Q6ZSJ9 500 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 SLC35E3Q7Z769 313 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 CLDND2Q8NHS1 167 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 ZNF296Q8WUU4 475 aaPredicted RBP14.36□□□□□ -0.11
TPM1-228ENST00000560975 TP53RKQ96S44 253 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 GPR87Q9BY21 358 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 CALHM2Q9HA72 323 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 IGHV5-51A0A0C4DH38 117 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 MKRN2OSH3BPM6 223 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 HSPA12AO43301 675 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 MMP9P14780 707 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 DNLZQ5SXM8 178 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 C5orf24Q7Z6I8 188 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 CMTM1Q8IZ96 169 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 TMEM68Q96MH6 324 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 GLRX2Q9NS18 164 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 COPS7AQ9UBW8 275 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 ADAMTS9Q9P2N4 1935 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 IGHV3-20A0A0C4DH32 117 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 ZFP92A6NM28 416 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 SPRY1O43609 319 aaPredicted RBP14.36□□□□□ -0.11
TPM1-228ENST00000560975 SMAD4Q13485 552 aaKnown RBP14.36□□□□□ -0.11
TPM1-228ENST00000560975 JOSD1Q15040 202 aaPredicted RBP14.36□□□□□ -0.11
TPM1-228ENST00000560975 OR4D5Q8NGN0 318 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 RBM14Q96PK6 669 aaKnown RBP14.36□□□□□ -0.11
TPM1-228ENST00000560975 GPHA2Q96T91 129 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 TM2D1Q9BX74 207 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 MRPL37Q9BZE1 423 aaKnown RBP14.36□□□□□ -0.11
TPM1-228ENST00000560975 DECR2Q9NUI1 292 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 B3GAT1Q9P2W7 334 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 PIGLQ9Y2B2 252 aa14.36□□□□□ -0.11
TPM1-228ENST00000560975 NCOA6Q14686 2063 aaPredicted RBP14.36□□□□□ -0.11
TPM1-228ENST00000560975 AMBPP02760 352 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 DCAF7P61962 342 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 NUTF2P61970 127 aaKnown RBP14.35□□□□□ -0.11
TPM1-228ENST00000560975 FOXO1Q12778 655 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 PDCD1Q15116 288 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 THEM4Q5T1C6 240 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 FGF14Q92915 247 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 CABLES2Q9BTV7 478 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 MRPL13Q9BYD1 178 aaKnown RBP14.35□□□□□ -0.11
TPM1-228ENST00000560975 PNRC2Q9NPJ4 139 aaKnown RBP14.35□□□□□ -0.11
TPM1-228ENST00000560975 DCAF16Q9NXF7 216 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 OR14J1Q9UGF5 321 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 NKX2-1P43699 371 aaPredicted RBP14.35□□□□□ -0.11
TPM1-228ENST00000560975 CXorf66Q5JRM2 361 aaPredicted RBP14.35□□□□□ -0.11
TPM1-228ENST00000560975 FAM180AQ6UWF9 173 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 PARM1Q6UWI2 310 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 UEVLDQ8IX04 471 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 MRGPRX1Q96LB2 322 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 NDUFAF3Q9BU61 184 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 DDA1Q9BW61 102 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 NKX2-4Q9H2Z4 354 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 GPR173Q9NS66 373 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 PITPNC1Q9UKF7 332 aa14.35□□□□□ -0.11
TPM1-228ENST00000560975 DOCK8Q8NF50 2099 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 LIPT2A6NK58 231 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 SHISA7A6NL88 538 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 PROB1E7EW31 1015 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 CLDN34H7C241 214 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 SOX15O60248 233 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 PITX3O75364 302 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 CCL1P22362 96 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 TUBG1P23258 451 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 VAMP2P63027 116 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms