RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 OR8G1Q15617 311 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 GRK1Q15835 563 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 FAHD2BQ6P2I3 314 aaPredicted RBP10.99□□□□□ -0.65
SNX1-211ENST00000560829 SSX8Q7RTT4 187 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 SLC25A42Q86VD7 318 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 TMEM17Q86X19 198 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 Q8IYB0 196 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 SPERTQ8NA61 448 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 RELL2Q8NC24 303 aaPredicted RBP10.99□□□□□ -0.65
SNX1-211ENST00000560829 ZNF431Q8TF32 576 aaPredicted RBP10.99□□□□□ -0.65
SNX1-211ENST00000560829 FAHD2AQ96GK7 314 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 DMRTA2Q96SC8 542 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 PPA2Q9H2U2 334 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 IFT22Q9H7X7 185 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 SPACA1Q9HBV2 294 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 C12orf4Q9NQ89 552 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 ANXA10Q9UJ72 324 aa10.99□□□□□ -0.65
SNX1-211ENST00000560829 IGKV1D-8A0A087WSZ0 117 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 M0R1B8 84 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 MLNRO43193 412 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 CRYAAP02489 173 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 GLAP06280 429 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 ERP29P30040 261 aaKnown RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 NKX6-1P78426 367 aaPredicted RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 SRSF7Q16629 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNX1-211ENST00000560829 CHRFAM7AQ494W8 412 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 RGS7BPQ6MZT1 257 aaPredicted RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 UNQ6494/PRO21346Q6UXR6 183 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 PEG10Q86TG7 708 aaKnown RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 FAM58AQ8N1B3 248 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 MUC20Q8N307 709 aaPredicted RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 SCCPDHQ8NBX0 429 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 OR52B4Q8NGK2 314 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 CAPSLQ8WWF8 208 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 MAFIPQ8WZ33 124 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 ZNF486Q96H40 463 aaPredicted RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 FN3KRPQ9HA64 309 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 IL36RNQ9UBH0 155 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 ZNF222Q9UK12 451 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 OSGIN2Q9Y236 505 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 SPEF1Q9Y4P9 236 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 C16orf97H3BN30 126 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 TIMM8AO60220 97 aaPredicted RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 NOS1APO75052 506 aaPredicted RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 RHBDL1O75783 438 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 ZNF250P15622 560 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 PRKACAP17612 351 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 GLRXP35754 106 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 FABP6P51161 128 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 TSPAN5P62079 268 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 GTF3C1Q12789 2109 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 PDCD1Q15116 288 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 C4orf46Q504U0 113 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 AADACL3Q5VUY0 350 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 BRICD5Q6PL45 260 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 Q6ZR03 302 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 Q6ZS49 121 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 TMED4Q7Z7H5 227 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 BATF2Q8N1L9 274 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 OR13G1Q8NGZ3 307 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 GTF3AQ92664 365 aaKnown RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 ZNF488Q96MN9 340 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 NRIP2Q9BQI9 281 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 ZNF436Q9C0F3 470 aaPredicted RBP10.98□□□□□ -0.65
SNX1-211ENST00000560829 TLNRD1Q9H1K6 362 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 CXXC4Q9H2H0 198 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 ZNF442Q9H7R0 627 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 EHFQ9NZC4 300 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 GPR132Q9UNW8 380 aa10.98□□□□□ -0.65
SNX1-211ENST00000560829 H0YL77 283 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 FABP7O15540 132 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 PGA5P0DJD9 388 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 FPR2P25090 351 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 SURF2Q15527 256 aaPredicted RBP10.97□□□□□ -0.65
SNX1-211ENST00000560829 C22orf34Q6ZV56 151 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 NCCRP1Q6ZVX7 275 aaPredicted RBP10.97□□□□□ -0.65
SNX1-211ENST00000560829 ZCCHC14Q8WYQ9 949 aaKnown RBP10.97□□□□□ -0.65
SNX1-211ENST00000560829 RND1Q92730 232 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 SCGB3A2Q96PL1 93 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 PRORYQ9H606 182 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 DLL4Q9NR61 685 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 DECR2Q9NUI1 292 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 SH3BGRL2Q9UJC5 107 aa10.97□□□□□ -0.65
SNX1-211ENST00000560829 INTS1Q8N201 2190 aaKnown RBP10.96□□□□□ -0.65
SNX1-211ENST00000560829 OR2A4O95047 310 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 NAPSAO96009 420 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 IGHV3-13P01766 116 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 ZBTB25P24278 435 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 ECI1P42126 302 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 TAS2R31P59538 309 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 ARPC4P59998 168 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 UBE2MP61081 183 aaKnown RBP10.96□□□□□ -0.65
SNX1-211ENST00000560829 DHRS2Q13268 280 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 IKZF1Q13422 519 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 IGFBP7Q16270 282 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 MSMPQ1L6U9 139 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 ZNF660Q6AZW8 331 aaPredicted RBP10.96□□□□□ -0.65
SNX1-211ENST00000560829 Q6ZPA2 131 aa10.96□□□□□ -0.65
SNX1-211ENST00000560829 ZBTB8BQ8NAP8 495 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms