RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 C5orf52A6NGY3 159 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 SMIM23A6NLE4 172 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 C17orf98A8MV24 154 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 CFLARO15519 480 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 FGF16O43320 207 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 TGOLN2O43493 480 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 SGCEO43556 437 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 RNF13O43567 381 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 IFNA10P01566 189 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 DBIP07108 87 aaKnown RBP4.74□□□□□ -1.65
HERC1-208ENST00000560462 CD7P09564 240 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 VDAC1P21796 283 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 MAPK3P27361 379 aaPredicted RBP4.74□□□□□ -1.65
HERC1-208ENST00000560462 NAA10P41227 235 aaPredicted RBP4.74□□□□□ -1.65
HERC1-208ENST00000560462 GUCA1AP43080 201 aaPredicted RBP4.74□□□□□ -1.65
HERC1-208ENST00000560462 GMFBP60983 142 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 MZT1Q08AG7 82 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 KIAA0141Q14154 515 aaPredicted RBP4.74□□□□□ -1.65
HERC1-208ENST00000560462 DEFB135Q30KP9 77 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 OR4F3Q6IEY1 312 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 LCN8Q6JVE9 175 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 NANOGP8Q6NSW7 305 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 TNFAIP8L2Q6P589 184 aaPredicted RBP4.74□□□□□ -1.65
HERC1-208ENST00000560462 TMPRSS11FQ6ZWK6 438 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 CCDC190Q86UF4 302 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 CALHM1Q8IU99 346 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 CCDC63Q8NA47 563 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 OR5J2Q8NH18 312 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 ANGPTL6Q8NI99 470 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 MIPOL1Q8TD10 442 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 TCP10LQ8TDR4 215 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 DEFB104AQ8WTQ1 72 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 SEPHS2Q99611 448 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 EPYCQ99645 322 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 SLC5A7Q9GZV3 580 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 RPS6KB2Q9UBS0 482 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 DCDC2Q9UHG0 476 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 BAIAP2L1Q9UHR4 511 aa4.74□□□□□ -1.65
HERC1-208ENST00000560462 ZNF443Q9Y2A4 671 aaPredicted RBP4.74□□□□□ -1.65
HERC1-208ENST00000560462 MRPS28Q9Y2Q9 187 aaKnown RBP4.74□□□□□ -1.65
HERC1-208ENST00000560462 LRP1Q07954 4544 aaKnown RBP4.74□□□□□ -1.65
HERC1-208ENST00000560462 IGHV4OR15-8A0A075B7B6 117 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 A0A087WW49 117 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 LOC102724200A0A096LPH7 203 aaPredicted RBP4.73□□□□□ -1.65
HERC1-208ENST00000560462 RNF103-CHMP3A0A140T963 221 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 IZUMO1RA6ND01 250 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 CENPBD1B2RD01 187 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 LRRN3E7EW58 273 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 H3BQF6 201 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 POLR3GO15318 223 aaPredicted RBP4.73□□□□□ -1.65
HERC1-208ENST00000560462 PLIN3O60664 434 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 LYPD3O95274 346 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 OXTP01178 125 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 SHBGP04278 402 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 LAMP1P11279 417 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 SDC1P18827 310 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 BGNP21810 368 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 HPCAL1P37235 193 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 GABRA2P47869 451 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 NPBWR2P48146 333 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 ACTA2P62736 377 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 RPL38P63173 70 aaKnown RBP4.73□□□□□ -1.65
HERC1-208ENST00000560462 ACTG2P63267 376 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 ACTC1P68032 377 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 ACTA1P68133 377 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 FMODQ06828 376 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 SCRN3Q0VDG4 424 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 MAD2L1Q13257 205 aaPredicted RBP4.73□□□□□ -1.65
HERC1-208ENST00000560462 ENDOGQ14249 297 aaKnown RBP4.73□□□□□ -1.65
HERC1-208ENST00000560462 GK2Q14410 553 aaPredicted RBP4.73□□□□□ -1.65
HERC1-208ENST00000560462 CCDC153Q494R4 210 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 WDR82Q6UXN9 313 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 ZBTB49Q6ZSB9 765 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 NKAIN4Q8IVV8 208 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 C4orf33Q8N1A6 199 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 CLEC4FQ8N1N0 589 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 UBLCP1Q8WVY7 318 aaPredicted RBP4.73□□□□□ -1.65
HERC1-208ENST00000560462 DNAJA4Q8WW22 397 aaPredicted RBP4.73□□□□□ -1.65
HERC1-208ENST00000560462 ITFG2Q969R8 447 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 ZBTB18Q99592 522 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 WDR13Q9H1Z4 485 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 C1orf21Q9H246 121 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 SLC38A1Q9H2H9 487 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 KLK15Q9H2R5 256 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 MTHFD2LQ9H903 347 aaPredicted RBP4.73□□□□□ -1.65
HERC1-208ENST00000560462 C12orf10Q9HB07 376 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 PLEKHA1Q9HB21 404 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 RRAGDQ9NQL2 400 aaPredicted RBP4.73□□□□□ -1.65
HERC1-208ENST00000560462 PTTG2Q9NZH5 202 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 DPM3Q9P2X0 92 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 FIS1Q9Y3D6 152 aa4.73□□□□□ -1.65
HERC1-208ENST00000560462 TRBV5-3A0A0A0MS03 114 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 IGHV2-26A0A0B4J1V2 119 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 IGKV1D-43A0A0B4J1Z2 117 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 A0A1W2PPI3 338 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 GMNCA6NCL1 334 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 GAGE12JA6NER3 117 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 COPEO14579 308 aa4.72□□□□□ -1.65
HERC1-208ENST00000560462 RBP4P02753 201 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms