RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 CDK2P24941 298 aa13.06□□□□□ -0.32
HERC1-207ENST00000560316 SLC35B1P78383 322 aa13.06□□□□□ -0.32
HERC1-207ENST00000560316 CEP19Q96LK0 163 aa13.06□□□□□ -0.32
HERC1-207ENST00000560316 NIPSNAP1Q9BPW8 284 aa13.06□□□□□ -0.32
HERC1-207ENST00000560316 DGCR6LQ9BY27 220 aa13.06□□□□□ -0.32
HERC1-207ENST00000560316 CADM1Q9BY67 442 aaKnown RBP13.06□□□□□ -0.32
HERC1-207ENST00000560316 DCLRE1BQ9H816 532 aa13.06□□□□□ -0.32
HERC1-207ENST00000560316 DNAJB9Q9UBS3 223 aa13.06□□□□□ -0.32
HERC1-207ENST00000560316 NUFIP1Q9UHK0 495 aaKnown RBP13.06□□□□□ -0.32
HERC1-207ENST00000560316 U3KQV3 271 aa13.06□□□□□ -0.32
HERC1-207ENST00000560316 HYDINQ4G0P3 5121 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 H3BN98 237 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 LY6LH3BQJ8 138 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 BUB1B-PAK6H3BSN5 160 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 LY86O95711 162 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 TTRP02766 147 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 RPLP1P05386 114 aaKnown RBP13.05□□□□□ -0.32
HERC1-207ENST00000560316 FAM106CPP0CH98 169 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 DUSP1P28562 367 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 CEACAM3P40198 252 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 MNDAP41218 407 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 RBM39Q14498 530 aaKnown RBP13.05□□□□□ -0.32
HERC1-207ENST00000560316 HLA-DRB5Q30154 266 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 UTF1Q5T230 341 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 OR52W1Q6IF63 320 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 LCNL1Q6ZST4 164 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 OVCH2Q7RTZ1 564 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 COMMD1Q8N668 190 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 C5orf56Q8N8D9 126 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 BBS1Q8NFJ9 593 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 MROQ9BYG7 248 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.05□□□□□ -0.32
HERC1-207ENST00000560316 GTF2A1LQ9UNN4 478 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 UBE2J1Q9Y385 318 aaPredicted RBP13.05□□□□□ -0.32
HERC1-207ENST00000560316 V9GYS6 101 aa13.05□□□□□ -0.32
HERC1-207ENST00000560316 TOR1AO14656 332 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 CCDC22O60826 627 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 HSD17B1P14061 328 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 RPS7P62081 194 aaKnown RBP13.04□□□□□ -0.32
HERC1-207ENST00000560316 MICAQ29983 383 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 ZNF260Q3ZCT1 412 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 SLX4IPQ5VYV7 408 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 DEGS2Q6QHC5 323 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 HEPN1Q6WQI6 88 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 CPOQ8IVL8 374 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 STPG2Q8N412 459 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 OR14K1Q8NGZ2 314 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 OR8U1Q8NH10 309 aa13.04□□□□□ -0.32
HERC1-207ENST00000560316 EMG1Q92979 244 aaKnown RBP13.04□□□□□ -0.32
HERC1-207ENST00000560316 KIAA2026Q5HYC2 2103 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 IGKV1-27A0A075B6S5 117 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 FAM90A18PA6NE21 464 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 FAM90A16PA6NEW6 464 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 FAM90A20PA6NIJ5 464 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 LINC01548A6NM66 108 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 FAM90A9PA6NNJ1 464 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 FAM90A12PA8MX19 464 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 FAM90A5PA8MXJ8 464 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 PRODHO43272 600 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 MRPL3P09001 348 aaKnown RBP13.03□□□□□ -0.32
HERC1-207ENST00000560316 FAM90A15PP0C7V4 464 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 FAM90A13PP0C7W8 464 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 FAM90A14PP0C7W9 464 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 FAM90A24PP0C7X0 464 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 CALCBP10092 127 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 OR3A1P47881 315 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 P2RX3P56373 397 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 ZNF91Q05481 1191 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 HNF4GQ14541 408 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 ZNF829Q3KNS6 432 aaPredicted RBP13.03□□□□□ -0.32
HERC1-207ENST00000560316 CCDC144NLQ6NUI1 221 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 SLC35E3Q7Z769 313 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 OR56B4Q8NH76 319 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 CREB3L1Q96BA8 519 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 GAL3ST2Q9H3Q3 398 aa13.03□□□□□ -0.32
HERC1-207ENST00000560316 TRGV10A0A0A0MS01 117 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 A0A1B0GTI1 187 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 MGST3O14880 152 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 CD34P28906 385 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 SNU13P55769 128 aaKnown RBP13.02□□□□□ -0.33
HERC1-207ENST00000560316 HES1Q14469 280 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 KIR2DS1Q14954 304 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 TEX38Q6PEX7 206 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 SLC25A26Q70HW3 274 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 THNSL2Q86YJ6 484 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 ZNF679Q8IYX0 411 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 CMTM5Q96DZ9 223 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 CITED4Q96RK1 184 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 YIPF3Q9GZM5 350 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 RBFOX1Q9NWB1 397 aaKnown RBP13.02□□□□□ -0.33
HERC1-207ENST00000560316 IKZF2Q9UKS7 526 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 COPS3Q9UNS2 423 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 SLC7A11Q9UPY5 501 aa13.02□□□□□ -0.33
HERC1-207ENST00000560316 SAMHD1Q9Y3Z3 626 aaKnown RBP13.02□□□□□ -0.33
HERC1-207ENST00000560316 OOSP1A8MZH6 123 aa13.01□□□□□ -0.33
HERC1-207ENST00000560316 ZNF254O75437 659 aa13.01□□□□□ -0.33
HERC1-207ENST00000560316 SRSF10O75494 262 aaKnown RBP13.01□□□□□ -0.33
HERC1-207ENST00000560316 IGHG2P01859 326 aa13.01□□□□□ -0.33
HERC1-207ENST00000560316 TMEM11P17152 192 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms