RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 RELQ04864 619 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 PMCHL1Q16048 86 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 CTF1Q16619 201 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 AWAT1Q58HT5 328 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 ABHD3Q8WU67 409 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 IGHV4-34P06331 123 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 GFRALQ6UXV0 394 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 STXBP6Q8NFX7 210 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 WNT16Q9UBV4 365 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 IFT172Q9UG01 1749 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 A0A1W2PNR3 127 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 TARM1B6A8C7 271 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 H0YIG0 161 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 HMGN4O00479 90 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 GEMIN2O14893 280 aaKnown RBP12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 IL4P05112 153 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 CLPPQ16740 277 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 TMEM207Q6UWW9 146 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 FAM219AQ8IW50 185 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR4C3Q8NH37 302 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR1F12Q8NHA8 337 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 ERRFI1Q9UJM3 462 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 CD22P20273 847 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR3A4PP47883 348 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 NDUFB6O95139 128 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 SPATA46Q5T0L3 261 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 MRPL54Q6P161 138 aaKnown RBP12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 FUNDC1Q8IVP5 155 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 C20orf196Q8IYI0 205 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 SPICQ8N5J4 248 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 HRO43593 1189 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 HBZP02008 142 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 AVPR2P30518 371 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 TRILQ7L0X0 811 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 PRNTQ86SH4 94 aa12.39□□□□□ -0.43
CSPG4P12-202ENST00000559989 TAPBPO15533 448 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 CA3P07451 260 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 JKAMPQ9P055 326 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 HMSDA8MTL9 139 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 SLC17A2O00624 439 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 GUCA2AQ02747 115 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 FGF13Q92913 245 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 PCOLCE2Q9UKZ9 415 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 TSPAN12O95859 305 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR5AC1P0C628 307 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 P2RY1P47900 373 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 CSNK1EP49674 416 aaKnown RBP12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 LINC01387J3KSC0 135 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 GPX2P18283 190 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 MAS1LP35410 378 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 PFN3P60673 137 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 MRPL58Q14197 206 aaKnown RBP12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 GSG1Q2KHT4 349 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 MEIG1Q5JSS6 88 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 TTC9BQ8N6N2 239 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 TMEM101Q96IK0 257 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 TNFRSF19Q9NS68 423 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 DEFB108AA8MXU0 73 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 AFMIDQ63HM1 303 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 FBXO17Q96EF6 278 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 WFIKKN1Q96NZ8 548 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 TMEM272A0A1B0GTI8 110 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 SOCS7O14512 581 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 DSCR4P56555 118 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 YIPF6Q96EC8 236 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 PRELID3AQ96N28 172 aa12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 FGF20Q9NP95 211 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 MBNL1Q9NR56 388 aaKnown RBP12.38□□□□□ -0.43
CSPG4P12-202ENST00000559989 FAM181BA6NEQ2 426 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 ARG1P05089 322 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 VWA2Q5GFL6 755 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 RLN3Q8WXF3 142 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 C1RLQ9NZP8 487 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 SLC25A17O43808 307 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 SMIM18P0DKX4 95 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 B4GALT1P15291 398 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 HTRA3P83110 453 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 UBALD2Q8IYN6 164 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 SIGLEC11Q96RL6 698 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 CA10Q9NS85 328 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 C19orf53Q9UNZ5 99 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 FAM3BP58499 235 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 PWWP2BQ6NUJ5 590 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR13G1Q8NGZ3 307 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 CACNA1CQ13936 2221 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 PLPP1O14494 284 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 SMIM13P0DJ93 91 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 CGB2Q6NT52 195 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 PRSS54Q6PEW0 395 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 Q7L0L9 218 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 ASCL5Q7RTU5 278 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 F2RL2O00254 374 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 ISL1P61371 349 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 FAHD2BQ6P2I3 314 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 MFRPQ9BY79 579 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 SAP30LQ9HAJ7 183 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 UQCR10Q9UDW1 63 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 MPC2O95563 127 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 RNPS1Q15287 305 aaKnown RBP12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms