RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	LY6G5B	Q8NDX9	201 aa		11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TMEM185A	Q8NFB2	350 aa		11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	OR13C5	Q8NGS8	318 aa		11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	H1FX	Q92522	213 aa	Known RBP	11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	EMG1	Q92979	244 aa	Known RBP	11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	OR5M11	Q96RB7	305 aa		11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	CCDC90B	Q9GZT6	254 aa		11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	RHOF	Q9HBH0	211 aa		11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TAS2R4	Q9NYW5	299 aa		11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	NUP50	Q9UKX7	468 aa		11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	LSM2	Q9Y333	95 aa	Known RBP	11.3	□□□□□ -0.6
CHRNB4-204	ENST00000559849	CHRM2	P08172	466 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	BCL3	P20749	454 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	FPR2	P25090	351 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	CAPZA1	P52907	286 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	ARF6	P62330	175 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	PPP3R1	P63098	170 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	METTL11B	Q5VVY1	283 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	CRIP3	Q6Q6R5	217 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	PRSS48	Q7RTY5	328 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	RNF144B	Q7Z419	303 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	SPART	Q8N0X7	666 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	OR51A2	Q8NGJ7	313 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	OR5D18	Q8NGL1	313 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	C8orf46	Q8TAG6	207 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	WDFY2	Q96P53	400 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	SEBOX	Q9HB31	216 aa	Predicted RBP	11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TMEM138	Q9NPI0	162 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	RBFOX1	Q9NWB1	397 aa	Known RBP	11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	CKLF	Q9UBR5	152 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	ZNF701	M0R085	212 aa	Predicted RBP	11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	ANGPTL7	O43827	346 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TOX4	O94842	621 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	ALDOB	P05062	364 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TMEM225B	P0DP42	221 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	CEBPD	P49716	269 aa	Predicted RBP	11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	GPR50	Q13585	617 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	DOC2B	Q14184	412 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	NEDD8	Q15843	81 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	KLF17	Q5JT82	389 aa	Predicted RBP	11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	MS4A15	Q8N5U1	240 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	THRSP	Q92748	146 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	GPER1	Q99527	375 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	PCGF1	Q9BSM1	259 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	FAM234A	Q9H0X4	552 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	KPTN	Q9Y664	436 aa		11.29	□□□□□ -0.6
CHRNB4-204	ENST00000559849	FBN1	P35555	2871 aa	Known RBP	11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	IGKV1-12	A0A0C4DH73	117 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	GPX5	O75715	221 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	KDM4B	O94953	1096 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	IGKV1D-12	P01611	117 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TK1	P04183	234 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TGFBR2	P37173	567 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	ZNF146	Q15072	292 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	OR52N4	Q8NGI2	321 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	OR14A2	Q96R54	314 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	PLGRKT	Q9HBL7	147 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	HMG20A	Q9NP66	347 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	GLS2	Q9UI32	602 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TRBV23-1	A0A0A0MS06	115 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849		A0A0A6YYJ9	748 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	BOLA2-SMG1P6	H3BVE0	249 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TCF21	O43680	179 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	MMP9	P14780	707 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	PRKACA	P17612	351 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	IGFBP3	P17936	291 aa	Predicted RBP	11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	MAPK3	P27361	379 aa	Predicted RBP	11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	BDKRB2	P30411	391 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	ZP1	P60852	638 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	COL10A1	Q03692	680 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	SPIN3	Q5JUX0	258 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	GPR141	Q7Z602	305 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	CMTM4	Q8IZR5	234 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TBC1D15	Q8TC07	691 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	ZNF418	Q8TF45	676 aa	Predicted RBP	11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	ORAI1	Q96D31	301 aa		11.28	□□□□□ -0.6
CHRNB4-204	ENST00000559849	TRBV5-7	A0A0A0MS05	114 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849		A0A1W2PPK0	400 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849		K7N7A8	449 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SFTPB	P07988	381 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	IGHV4-38-2	P0DP08	117 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	S100A1	P23297	94 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	BPIFB2	Q8N4F0	458 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	KIR3DL3	Q8N743	410 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ASCC1	Q8N9N2	400 aa	Known RBP	11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PXT1	Q8NFP0	134 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	OR5D13	Q8NGL4	314 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	C22orf15	Q8WYQ4	148 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SIRPD	Q9H106	197 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ISYNA1	Q9NPH2	558 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ONECUT1	Q9UBC0	465 aa		11.27	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TRAV40	A0A0B4J280	105 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849		A0A1W2PQ09	198 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CCDC160	A6NGH7	325 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MRPS14	O60783	128 aa	Known RBP	11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	HAND1	O96004	215 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	JUNB	P17275	347 aa	Predicted RBP	11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	FST	P19883	344 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ZNF93	P35789	620 aa	Predicted RBP	11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	BPIFB3	P59826	476 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms