RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 TIMM8AO60220 97 aaPredicted RBP10.79□□□□□ -0.68
USP3-213ENST00000559711 RHBDL1O75783 438 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 SULT1A3P0DMM9 295 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 SULT1A4P0DMN0 295 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 CA7P43166 264 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 CASP6P55212 293 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 ERVK11-1P61568 191 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 ZNF154Q13106 437 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 PDCD1Q15116 288 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 IGFBP7Q16270 282 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 SCGB2B2Q4G0G5 96 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 ATPAF1Q5TC12 328 aaPredicted RBP10.79□□□□□ -0.68
USP3-213ENST00000559711 ZNF626Q68DY1 528 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 Q6ZR03 302 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 OVCH2Q7RTZ1 564 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 Q8IYB0 196 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 FAM58AQ8N1B3 248 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 BATF2Q8N1L9 274 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 ZDHHC22Q8N966 263 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 OR11H7Q8NGC8 314 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 OR5AP2Q8NGF4 316 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 OR5H2Q8NGV7 314 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 OR13G1Q8NGZ3 307 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 SEC22CQ9BRL7 303 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 HDHD3Q9BSH5 251 aaPredicted RBP10.79□□□□□ -0.68
USP3-213ENST00000559711 CXXC4Q9H2H0 198 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 POLDIP2Q9Y2S7 368 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 TRGV8A0A0C4DH27 118 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 TMEM8BA6NDV4 472 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 OR2AT4A6NND4 320 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 CEACAM18A8MTB9 384 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 SSNA1O43805 119 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 CREBL2O60519 120 aaPredicted RBP10.79□□□□□ -0.68
USP3-213ENST00000559711 NOS1APO75052 506 aaPredicted RBP10.79□□□□□ -0.68
USP3-213ENST00000559711 IGHV3-13P01766 116 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 FCGR3AP08637 254 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 CD40P25942 277 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 MRPS15P82914 257 aaKnown RBP10.79□□□□□ -0.68
USP3-213ENST00000559711 MAB21L1Q13394 359 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 MSMPQ1L6U9 139 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 ALKBH2Q6NS38 261 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 BRICD5Q6PL45 260 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 TERB2Q8NHR7 220 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 CCDC107Q8WV48 283 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 DACT3Q96B18 629 aaPredicted RBP10.79□□□□□ -0.68
USP3-213ENST00000559711 ZNF488Q96MN9 340 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 NRIP2Q9BQI9 281 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 TLNRD1Q9H1K6 362 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 IFT22Q9H7X7 185 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 ZNF701Q9NV72 531 aaPredicted RBP10.79□□□□□ -0.68
USP3-213ENST00000559711 IL36RNQ9UBH0 155 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 FZR1Q9UM11 496 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 PRR14LQ5THK1 2151 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 IGKV1D-8A0A087WSZ0 117 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 UBE2QL1A1L167 161 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 CDIPTO14735 213 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 GLAP06280 429 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 PGA5P0DJD9 388 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 PRKACAP17612 351 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 OR3A3P47888 321 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 GRK1Q15835 563 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 CHRFAM7AQ494W8 412 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 ZFP69Q49AA0 526 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 LHFPL1Q86WI0 220 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 KDF1Q8NAX2 398 aaPredicted RBP10.78□□□□□ -0.68
USP3-213ENST00000559711 TMEM171Q8WVE6 324 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 MAFIPQ8WZ33 124 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 DMRTB1Q96MA1 342 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 TRAF4Q9BUZ4 470 aaPredicted RBP10.78□□□□□ -0.68
USP3-213ENST00000559711 ZNF442Q9H7R0 627 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 SPACA1Q9HBV2 294 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 ANXA10Q9UJ72 324 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 VSIG4Q9Y279 399 aa10.78□□□□□ -0.68
USP3-213ENST00000559711 ZGRF1Q86YA3 2104 aa10.77□□□□□ -0.68
USP3-213ENST00000559711 POLEQ07864 2286 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 IGLV3-9A0A075B6K5 115 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 MEIKINA0A087WXM9 373 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 CXCL3P19876 107 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 RPS23P62266 143 aaKnown RBP10.77□□□□□ -0.69
USP3-213ENST00000559711 SRSF7Q16629 238 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP3-213ENST00000559711 SLC25A42Q86VD7 318 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 TMEM17Q86X19 198 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 C11orf53Q8IXP5 236 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 SPICQ8N5J4 248 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 DYRK2Q92630 601 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 GTF3AQ92664 365 aaKnown RBP10.77□□□□□ -0.69
USP3-213ENST00000559711 PPA2Q9H2U2 334 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 C12orf4Q9NQ89 552 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 ZNF69Q9UC07 566 aa10.77□□□□□ -0.69
USP3-213ENST00000559711 ATP6V1G2-DDX39BF2Z307 99 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 F5H5P2 479 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 THBDP07204 575 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 GRPP07492 148 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 OR4E1P0C645 316 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 PPP3CBP16298 524 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 PTAFRP25105 342 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 TSPAN5P62079 268 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 MZT1Q08AG7 82 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 IKZF1Q13422 519 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 CDK10Q15131 360 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms