RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 FUT6P51993 359 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 ZNF91Q05481 1191 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 IL18R1Q13478 541 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 FLOT2Q14254 428 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 EDDM3AQ14507 147 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 ZBTB49Q6ZSB9 765 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 SSX6Q7RTT6 188 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 SPATA24Q86W54 205 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 Q8IYB0 196 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 OR4P4Q8NGL7 312 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 TMEM163Q8TC26 289 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 LIN7BQ9HAP6 207 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 IL36RNQ9UBH0 155 aa10.48□□□□□ -0.73
TPM1-220ENST00000559556 ZAR1LA6NP61 321 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 H3BUI4 141 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 K7EIL1 84 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 SYT7O43581 403 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 PSPNO60542 156 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 MPIG6BO95866 241 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 KRT8P05787 483 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 PF4V1P10720 104 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 HTR1DP28221 377 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 EPHA2P29317 976 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 SLC35A2P78381 396 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 GRK1Q15835 563 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 TCTEX1D4Q5JR98 221 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 SLX4IPQ5VYV7 408 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 C12orf73Q69YU5 71 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 SLC25A26Q70HW3 274 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 GID4Q8IVV7 300 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 ENTHD1Q8IYW4 607 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 TPRX1Q8N7U7 411 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 TCEANCQ8N8B7 351 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 YIPF7Q8N8F6 280 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 CCDC54Q8NEL0 328 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 OR52N4Q8NGI2 321 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 EMG1Q92979 244 aaKnown RBP10.47□□□□□ -0.73
TPM1-220ENST00000559556 C10orf35Q96D05 121 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 AKR1E2Q96JD6 320 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 CHST6Q9GZX3 395 aa10.47□□□□□ -0.73
TPM1-220ENST00000559556 UBE2J1Q9Y385 318 aaPredicted RBP10.47□□□□□ -0.73
TPM1-220ENST00000559556 TSSC4Q9Y5U2 329 aaPredicted RBP10.47□□□□□ -0.73
TPM1-220ENST00000559556 TRBV2A0A0J9YWF9 115 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 MGST3O14880 152 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 RPP14O95059 124 aaKnown RBP10.46□□□□□ -0.73
TPM1-220ENST00000559556 PF4P02776 101 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 GABRR1P24046 479 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 ERP29P30040 261 aaKnown RBP10.46□□□□□ -0.73
TPM1-220ENST00000559556 OR3A1P47881 315 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 RASSF2P50749 326 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 ZNF146Q15072 292 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 ODF4Q2M2E3 257 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 SPIN3Q5JUX0 258 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 CCDC121Q6ZUS5 278 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 EGFL6Q8IUX8 553 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 DNAAF1Q8NEP3 725 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 PP6455Q8WZ26 134 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 UTP4Q969X6 686 aaKnown RBP10.46□□□□□ -0.73
TPM1-220ENST00000559556 BORCS8Q96FH0 119 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 RCC1LQ96I51 464 aaKnown RBP10.46□□□□□ -0.73
TPM1-220ENST00000559556 SLC25A33Q9BSK2 321 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 KRT84Q9NSB2 600 aa10.46□□□□□ -0.73
TPM1-220ENST00000559556 RBFOX1Q9NWB1 397 aaKnown RBP10.46□□□□□ -0.73
TPM1-220ENST00000559556 H2AFY2Q9P0M6 372 aaPredicted RBP10.46□□□□□ -0.73
TPM1-220ENST00000559556 LOC107986453A0A1B0GWG9 222 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 H3BSH0 61 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 ENTPD6O75354 484 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 MMP23AO75900 390 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 DUS4LO95620 317 aaKnown RBP10.45□□□□□ -0.74
TPM1-220ENST00000559556 IGLV1-47P01700 117 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 UBCP0CG48 685 aaKnown RBP10.45□□□□□ -0.74
TPM1-220ENST00000559556 BCL3P20749 454 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 CD34P28906 385 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 BRS3P32247 399 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 NPBWR2P48146 333 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 RBP2P50120 134 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 P2RX3P56373 397 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 BDH1Q02338 343 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 VAX1Q5SQQ9 334 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 OR52W1Q6IF63 320 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 HEPN1Q6WQI6 88 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 CENPVQ7Z7K6 275 aaPredicted RBP10.45□□□□□ -0.74
TPM1-220ENST00000559556 RTN4RL2Q86UN3 420 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 FAM58AQ8N1B3 248 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 PRSS35Q8N3Z0 413 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 MYDGFQ969H8 173 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 IL4I1Q96RQ9 567 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 TBX5Q99593 518 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 GAL3ST2Q9H3Q3 398 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 DPM3Q9P2X0 92 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 WARS2Q9UGM6 360 aaKnown RBP10.45□□□□□ -0.74
TPM1-220ENST00000559556 POMPQ9Y244 141 aa10.45□□□□□ -0.74
TPM1-220ENST00000559556 A0A1W2PQL4 384 aaPredicted RBP10.44□□□□□ -0.74
TPM1-220ENST00000559556 TCRBV4S1A1TA0A5B7 111 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 METTL15A6NJ78 407 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 MITFO75030 526 aaPredicted RBP10.44□□□□□ -0.74
TPM1-220ENST00000559556 SULT1C4O75897 302 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 OR2F2O95006 317 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 INMTO95050 263 aa10.44□□□□□ -0.74
TPM1-220ENST00000559556 SERPINA3P01011 423 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms