RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 FOXI3A8MTJ6 420 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 DEFB108AA8MXU0 73 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 LEUTXA8MZ59 168 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 NGFP01138 241 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 FAHP16930 419 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 CD40P25942 277 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 LOXP28300 417 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 RPS27AP62979 156 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 NAAAQ02083 359 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 SRSF4Q08170 494 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 SNAI3Q3KNW1 292 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 CLLU1Q5K131 121 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 SGK3Q96BR1 496 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 CST11Q9H112 138 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 ABCA4P78363 2273 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 IGHV2OR16-5A0A0B4J2B6 119 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 CRTAPO75718 401 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 ZBTB25P24278 435 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 BSPH1Q075Z2 132 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 GK2Q14410 553 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 ESCO2Q56NI9 601 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 C1QTNF12Q5T7M4 302 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 FAHD2BQ6P2I3 314 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 C1QL2Q7Z5L3 287 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 FAHD2AQ96GK7 314 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 HS3ST6Q96QI5 342 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 CITED4Q96RK1 184 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 OCSTAMPQ9BR26 566 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 PIGLQ9Y2B2 252 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 MAB21L2Q9Y586 359 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 CRYBG3Q68DQ2 2970 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 HRNRQ86YZ3 2850 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 COL8A1P27658 744 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 C3orf36Q3SXR2 165 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 VAX1Q5SQQ9 334 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 LPCAT3Q6P1A2 487 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 C11orf88Q6PI97 169 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 MEX3BQ6ZN04 569 aaKnown RBP13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 C17orf107Q6ZR85 190 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR4K15Q8NH41 348 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 PLPPR2Q96GM1 343 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 PSMG3-AS1Q96PY0 264 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 ATPIF1Q9UII2 106 aa13.56□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR2AT4A6NND4 320 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 PLAUP00749 431 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 CD8AP01732 235 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 HLA-AP01891 365 aaKnown RBP13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 HLA-GP17693 338 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 S100A11P31949 105 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 APLNRP35414 380 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 GMFBP60983 142 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 ACTBL2Q562R1 376 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 NCMAPQ5T1S8 102 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 THOC7Q6I9Y2 204 aaKnown RBP13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 COLCA1Q6ZS62 124 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 LYG2Q86SG7 212 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 HOGA1Q86XE5 327 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR5M8Q8NGP6 311 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 ARHGAP5-AS1Q96IT6 56 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 TM2D1Q9BX74 207 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR51B6Q9H340 312 aa13.55□□□□□ -0.24
CDC42BPB-204ENST00000559043 ARPC5O15511 151 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 IFNA6P05013 189 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 CD34P28906 385 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 CBX5P45973 191 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 SP5Q6BEB4 398 aaPredicted RBP13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 SEMA6DQ8NFY4 1073 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 KCNN3Q9UGI6 736 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 STARD10Q9Y365 291 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 LRBAP50851 2863 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 C9orf170A2RU37 121 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 RFPL4AA6NLU0 287 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 CEACAM18A8MTB9 384 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 ATP6V1G2-DDX39BF2Z307 99 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 RFPL4AL1F8VTS6 287 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 ABCD4O14678 606 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 PMP2P02689 132 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 MGMTP16455 207 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 PTAFRP25105 342 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 PPP1R1AQ13522 171 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 HLXQ14774 488 aaPredicted RBP13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 MICBQ29980 383 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 TBC1D28Q2M2D7 210 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 DMRTC1Q5HYR2 192 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 NHLRC3Q5JS37 347 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 TMEM108Q6UXF1 575 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 TMUB2Q71RG4 321 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 ARRDC1Q8N5I2 433 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR51T1Q8NGJ9 327 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR5D18Q8NGL1 313 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 NPRL2Q8WTW4 380 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 MITD1Q8WV92 249 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 C1QTNF5Q9BXJ0 243 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 GSX2Q9BZM3 304 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 FN3KRPQ9HA64 309 aa13.54□□□□□ -0.24
CDC42BPB-204ENST00000559043 PLCE1Q9P212 2302 aa13.53□□□□□ -0.24
CDC42BPB-204ENST00000559043 TRAV14DV4A0A0A6YYC5 116 aa13.53□□□□□ -0.24
CDC42BPB-204ENST00000559043 RPA2P15927 270 aa13.53□□□□□ -0.24
CDC42BPB-204ENST00000559043 ACKR3P25106 362 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms