RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ENTHD1Q8IYW4 607 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 PARP16Q8N5Y8 322 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 SCCPDHQ8NBX0 429 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 OR1M1Q8NGA1 313 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 OR5L1Q8NGL2 311 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 HPSE2Q8WWQ2 592 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 SGCDQ92629 289 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 RORBQ92753 470 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 RAB1CQ92928 201 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 SPTSSAQ969W0 71 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 LGALS12Q96DT0 336 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 PLEKHA8Q96JA3 519 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 RNF170Q96K19 258 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 FAM71F1Q96KD3 344 aaPredicted RBP3.49□□□□□ -1.85
SPG11-211ENST00000558561 C1orf147Q96MC9 270 aaPredicted RBP3.49□□□□□ -1.85
SPG11-211ENST00000558561 DUX5Q96PT3 197 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 CCL13Q99616 98 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 GAL3ST1Q99999 423 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 GABARAPL3Q9BY60 117 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 YIPF3Q9GZM5 350 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 NDEL1Q9GZM8 345 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 SHARPINQ9H0F6 387 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 YY1AP1Q9H869 796 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 ESM1Q9NQ30 184 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 GPR84Q9NQS5 396 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 GPR173Q9NS66 373 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 IL36RNQ9UBH0 155 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 ZNF69Q9UC07 566 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 CLEC2DQ9UHP7 191 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 LAMP5Q9UJQ1 280 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 LSM4Q9Y4Z0 139 aaKnown RBP3.49□□□□□ -1.85
SPG11-211ENST00000558561 A3GALT2U3KPV4 340 aa3.49□□□□□ -1.85
SPG11-211ENST00000558561 DNHD1Q96M86 4753 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 PPIAL4EA0A075B759 164 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 LOC100130705A0A1B0GUX0 176 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 A0A1W2PRD5 423 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 A0A1W2PRF3 423 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 A0A1W2PRM7 423 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ERICH4A6NGS2 130 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 B4DSR2 109 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ZNF732B4DXR9 585 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 PPIAL4DF5H284 164 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 J3QLW9 94 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 TIMM23O14925 209 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 PTBP3O95758 552 aaKnown RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 LALBAP00709 142 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 SFTPBP07988 381 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ACAA1P09110 424 aaPredicted RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 GNAO1P09471 354 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 CSF3P09919 207 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 PPIAL4FP0DN26 164 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ANPEPP15144 967 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ZNF19P17023 458 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 MYF6P23409 242 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 HSD11B1P28845 292 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 HTR1FP30939 366 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 THBS3P49746 956 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 RGS6P49758 472 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ALDH3A2P51648 485 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 DVL1P1P54792 670 aaPredicted RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 BTG1P62324 171 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 GRB2P62993 217 aaKnown RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 MRPS11P82912 194 aaKnown RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 PAX8Q06710 450 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 GK3PQ14409 553 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 UBE2V2Q15819 145 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ZNF404Q494X3 552 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 WDR38Q5JTN6 314 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 SLC35D3Q5M8T2 416 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 UTF1Q5T230 341 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 NXNL2Q5VZ03 156 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 WDR25Q64LD2 544 aaPredicted RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 RUSC1-AS1Q66K80 236 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 WDR82Q6UXN9 313 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ZBTB49Q6ZSB9 765 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 C5orf24Q7Z6I8 188 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 CATSPERDQ86XM0 798 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 CALHM1Q8IU99 346 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ZNF679Q8IYX0 411 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ELMOD2Q8IZ81 293 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 PNKDQ8N490 385 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 FAM216BQ8N7L0 139 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 YIPF7Q8N8F6 280 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ZNF540Q8NDQ6 660 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 OR10H4Q8NGA5 316 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 OR51A4Q8NGJ6 313 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 RHOXF1Q8NHV9 184 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 CNIH3Q8TBE1 160 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 FAM81AQ8TBF8 368 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 TRMT10AQ8TBZ6 339 aaKnown RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 NPRL2Q8WTW4 380 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 LRRC29Q8WV35 223 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 OR5P3Q8WZ94 311 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 SNAPC3Q92966 411 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ERGIC1Q969X5 290 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 RBMXL1Q96E39 390 aaKnown RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 ZNF479Q96JC4 524 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 SPACA5Q96QH8 159 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ADAT1Q9BUB4 502 aaKnown RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 EGLN1Q9GZT9 426 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms