RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 ABHD12BQ7Z5M8 362 aaPredicted RBP9.78□□□□□ -0.84
PCAT29-201ENST00000558411 SFTPA1Q8IWL2 248 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 GBGT1Q8N5D6 347 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 CCDC71LQ8N9Z2 235 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 PTPMT1Q8WUK0 201 aaPredicted RBP9.78□□□□□ -0.84
PCAT29-201ENST00000558411 C11orf40Q8WZ69 217 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 SPIN2AQ99865 258 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 SPIN2BQ9BPZ2 258 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 Q9N2K0 584 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 SLC2A9Q9NRM0 540 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 STARD5Q9NSY2 213 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 GNG13Q9P2W3 67 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 MCTS1Q9ULC4 181 aaKnown RBP9.78□□□□□ -0.84
PCAT29-201ENST00000558411 NPIPA1Q9UND3 350 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 POLR3KQ9Y2Y1 108 aaPredicted RBP9.78□□□□□ -0.84
PCAT29-201ENST00000558411 PTRH2Q9Y3E5 179 aaKnown RBP9.78□□□□□ -0.84
PCAT29-201ENST00000558411 ALPK2Q86TB3 2170 aa9.78□□□□□ -0.84
PCAT29-201ENST00000558411 A6NCN8 305 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 FRG2CA6NGY1 282 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 TMEM225BP0DP42 221 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 ZNF17P17021 662 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 DTYMKP23919 212 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 NKX2-1P43699 371 aaPredicted RBP9.77□□□□□ -0.84
PCAT29-201ENST00000558411 DCAF7P61962 342 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 KISS1Q15726 138 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 ARSJQ5FYB0 599 aaPredicted RBP9.77□□□□□ -0.84
PCAT29-201ENST00000558411 SAPCD1Q5SSQ6 148 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 P4HA3Q7Z4N8 544 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 OR8B12Q8NGG6 310 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 OR5C1Q8NGR4 320 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 HLA-CQ95604 372 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 RELTQ969Z4 430 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 DNAJA3Q96EY1 480 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 REEP6Q96HR9 211 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 NKX2-4Q9H2Z4 354 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 LIME1Q9H400 295 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 SERGEFQ9UGK8 458 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 NAT8Q9UHE5 227 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 NAGKQ9UJ70 344 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 LAMP3Q9UQV4 416 aa9.77□□□□□ -0.84
PCAT29-201ENST00000558411 YLPM1P49750 1951 aaKnown RBP9.77□□□□□ -0.85
PCAT29-201ENST00000558411 IGKV1-9A0A0C4DH69 117 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 PROB1E7EW31 1015 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 ATXN7O15265 892 aaPredicted RBP9.77□□□□□ -0.85
PCAT29-201ENST00000558411 TYMSP04818 313 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 EDN3P14138 238 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 MDKP21741 143 aaPredicted RBP9.77□□□□□ -0.85
PCAT29-201ENST00000558411 SLC37A1P57057 533 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 VAMP2P63027 116 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 NKAIN1Q4KMZ8 207 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 ARMC6Q6NXE6 501 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 GRINAQ7Z429 371 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 COMMD2Q86X83 199 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 ZNF100Q8IYN0 542 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 OR51G1Q8NGK1 321 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 MBD3L1Q8WWY6 194 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 TOMM40LQ969M1 308 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 ZNF845Q96IR2 970 aaPredicted RBP9.77□□□□□ -0.85
PCAT29-201ENST00000558411 OR5B12Q96R08 314 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 ATP5SQ99766 215 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 C20orf144Q9BQM9 153 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 PCED1AQ9H1Q7 454 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 SEMA5BQ9P283 1151 aa9.77□□□□□ -0.85
PCAT29-201ENST00000558411 PHF3Q92576 2039 aaKnown RBP9.77□□□□□ -0.85
PCAT29-201ENST00000558411 IGKV1D-43A0A0B4J1Z2 117 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 A0A1W2PP55 124 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 A0A1W2PQU0 124 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 FAM221AA4D161 298 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 MS4A18H0YCH9 400 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 HCRTR1O43613 425 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 SCGB1D1O95968 90 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 MMP7P09237 267 aaPredicted RBP9.76□□□□□ -0.85
PCAT29-201ENST00000558411 THEGLP0DJG4 465 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 HLA-DOBP13765 273 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 DYNLT3P51808 116 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 HSD17B7P56937 341 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 GPM6BQ13491 265 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 MS4A18Q3C1V0 323 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 LHX8Q68G74 356 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 CNKSR3Q6P9H4 555 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 CYP2G1PQ6ZSU1 146 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 C16orf82Q7Z2V1 217 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 TMEM123Q8N131 208 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 D2HGDHQ8N465 521 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 CISD2Q8N5K1 135 aaKnown RBP9.76□□□□□ -0.85
PCAT29-201ENST00000558411 OR2AJ1Q8NGZ0 328 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 IMMP2LQ96T52 175 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 RTN4RQ9BZR6 473 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 NXF5Q9H1B4 397 aaKnown RBP9.76□□□□□ -0.85
PCAT29-201ENST00000558411 LPAR2Q9HBW0 351 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 GLRX2Q9NS18 164 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 PLEKHJ1Q9NW61 149 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 KLHL13Q9P2N7 655 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 TRBV23OR9-2A0A075B6M9 112 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 ZNF850A8MQ14 1090 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 METTL12A8MUP2 240 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 ALG1L2C9J202 215 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 KLF8O95600 359 aaPredicted RBP9.76□□□□□ -0.85
PCAT29-201ENST00000558411 NUDT14O95848 222 aa9.76□□□□□ -0.85
PCAT29-201ENST00000558411 BRS3P32247 399 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms