RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 OR14J1Q9UGF5 321 aa6.99□□□□□ -1.29
TPM1-213ENST00000558400 SF3B6Q9Y3B4 125 aaKnown RBP6.99□□□□□ -1.29
TPM1-213ENST00000558400 IGHV1-69DA0A0B4J2H0 117 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 A0A1B0GW55 424 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 GPX5O75715 221 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 KDM4BO94953 1096 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 IGHV1-69P01742 117 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 CDK1P06493 297 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 SFTPBP07988 381 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 DUX4L2P0CJ85 424 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 DUX4L3P0CJ86 424 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 DUX4L4P0CJ87 422 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 DUX4L5P0CJ88 424 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 DUX4L6P0CJ89 424 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 DUX4L7P0CJ90 424 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 TMEM225BP0DP42 221 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 SELLP14151 372 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 CELP19835 753 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 MYF6P23409 242 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 SOX2P48431 317 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 AQP4P55087 323 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 COL10A1Q03692 680 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 MEF2CQ06413 473 aaPredicted RBP6.98□□□□□ -1.29
TPM1-213ENST00000558400 ACSM1Q08AH1 577 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 BAMBIQ13145 260 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 GPR50Q13585 617 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 Q499Y3 187 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 ELP2Q6IA86 826 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 LAIR2Q6ISS4 152 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 ZNF529Q6P280 563 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 DUX4L9Q6RFH8 374 aaPredicted RBP6.98□□□□□ -1.29
TPM1-213ENST00000558400 GDPD3Q7L5L3 318 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 CDH26Q8IXH8 852 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 MS4A15Q8N5U1 240 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 SIGLECL1Q8N7X8 197 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 ASCC1Q8N9N2 400 aaKnown RBP6.98□□□□□ -1.29
TPM1-213ENST00000558400 PXT1Q8NFP0 134 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 LHX4Q969G2 390 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 SLC25A28Q96A46 364 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 GPER1Q99527 375 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 S100A13Q99584 98 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 C19orf24Q9BVV8 132 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 MND1Q9BWT6 205 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 ANKRD60Q9BZ19 345 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 HMG20AQ9NP66 347 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 DUX4Q9UBX2 424 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 RAB26Q9ULW5 256 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 FAM96BQ9Y3D0 163 aa6.98□□□□□ -1.29
TPM1-213ENST00000558400 IGHV3OR16-10A0A075B7F0 116 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 TRBV5-5A0A0J9YX44 114 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 hADV38S2A0JD32 116 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 MEGF11A6BM72 1044 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 F8VVB4 439 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 F8VWA3 439 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 SPRY1O43609 319 aaPredicted RBP6.97□□□□□ -1.29
TPM1-213ENST00000558400 ZNF780AO75290 641 aaPredicted RBP6.97□□□□□ -1.29
TPM1-213ENST00000558400 ZNF737O75373 536 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 INMTO95050 263 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 HAND1O96004 215 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 PRKACAP17612 351 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 BCL3P20749 454 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 LMO1P25800 156 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 MAPK3P27361 379 aaPredicted RBP6.97□□□□□ -1.29
TPM1-213ENST00000558400 ERP29P30040 261 aaKnown RBP6.97□□□□□ -1.29
TPM1-213ENST00000558400 BDKRB2P30411 391 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 TGFBR2P37173 567 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 NPBWR2P48146 333 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 MTNR1BP49286 362 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 UBE2E1P51965 193 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 SLC35A2P78381 396 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 GPR176Q14439 515 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 SPHARQ15513 63 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 TMEM200BQ69YZ2 307 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 XAF1Q6GPH4 301 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 VMO1Q7Z5L0 202 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 SATL1Q86VE3 508 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 FAM185AQ8N0U4 392 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 BCL6BQ8N143 479 aaPredicted RBP6.97□□□□□ -1.29
TPM1-213ENST00000558400 OR8H2Q8N162 312 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 FGFRL1Q8N441 504 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 TMEM86BQ8N661 226 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 ZDHHC22Q8N966 263 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 CHST4Q8NCG5 386 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 GCDHQ92947 438 aaPredicted RBP6.97□□□□□ -1.29
TPM1-213ENST00000558400 Q9H521 79 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 DUSP21Q9H596 190 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 BLOC1S6Q9UL45 172 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 FOXJ3Q9UPW0 622 aa6.97□□□□□ -1.29
TPM1-213ENST00000558400 SIRT4Q9Y6E7 314 aaPredicted RBP6.97□□□□□ -1.29
TPM1-213ENST00000558400 MGST3O14880 152 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 DEGS1O15121 323 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 KCNAB3O43448 404 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 RGS10O43665 173 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 ANGPTL7O43827 346 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 RGS9O75916 674 aaPredicted RBP6.96□□□□□ -1.3
TPM1-213ENST00000558400 ATP6V1G2O95670 118 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 LALBAP00709 142 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 RBP4P02753 201 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 CSTBP04080 98 aaKnown RBP6.96□□□□□ -1.3
TPM1-213ENST00000558400 TFF1P04155 84 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms