RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 MITD1Q8WV92 249 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 APH1AQ96BI3 265 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 C10orf35Q96D05 121 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 RNF145Q96MT1 663 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 TSNARE1Q96NA8 513 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 PPA2Q9H2U2 334 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 JPT2Q9H910 190 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 PATZ1Q9HBE1 687 aaKnown RBP4.28□□□□□ -1.72
RTF1-204ENST00000558117 SLC25A19Q9HC21 320 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 TIGARQ9NQ88 270 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 IGHV2OR16-5A0A0B4J2B6 119 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 IGHV2-70DA0A0C4DH43 119 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 CENPVL3A0A0U1RRI6 287 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 EXOC1LA0A1B0GW35 172 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 ISPDA4D126 451 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 E7ESA3 106 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 ATP8B1O43520 1251 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 EFNA2O43921 213 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 OPN1SWP03999 348 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 THY1P04216 161 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 GSTA1P08263 222 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 ANXA3P12429 323 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 GCAP28676 217 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 OTX1P32242 354 aaPredicted RBP4.27□□□□□ -1.73
RTF1-204ENST00000558117 ZNF763Q0D2J5 394 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 GK3PQ14409 553 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 TGFBIQ15582 683 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 CHI3L2Q15782 390 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 HAGHQ16775 308 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 CPTPQ5TA50 214 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 BTNL3Q6UXE8 466 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 LINC00336Q6ZUF6 198 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 H2BFWTQ7Z2G1 175 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 CENPSQ8N2Z9 138 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 STXBP6Q8NFX7 210 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 GPX8Q8TED1 209 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.27□□□□□ -1.73
RTF1-204ENST00000558117 SGK3Q96BR1 496 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 ARL5BQ96KC2 179 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 TECTBQ96PL2 329 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 CENPKQ9BS16 269 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 OCR1Q9BZK8 76 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 WDR41Q9HAD4 459 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 PLEKHA3Q9HB20 300 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 TMBIM4Q9HC24 238 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 POLE4Q9NR33 117 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 C20orf96Q9NUD7 363 aaPredicted RBP4.27□□□□□ -1.73
RTF1-204ENST00000558117 BFARQ9NZS9 450 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 OR5V1Q9UGF6 321 aa4.27□□□□□ -1.73
RTF1-204ENST00000558117 KIR2DS1A0A191URI9 304 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 TCRBV9S1A1TA0A576 114 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 EIF3HO15372 352 aaKnown RBP eCLIP4.26□□□□□ -1.73
RTF1-204ENST00000558117 RGS16O15492 202 aaPredicted RBP4.26□□□□□ -1.73
RTF1-204ENST00000558117 CFLARO15519 480 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 SPAG7O75391 227 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 OR2F2O95006 317 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 VAPBO95292 243 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 IGKV3-15P01624 115 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 MLNP12872 115 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 PGAM1P18669 254 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 ME2P23368 584 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 FCGR2CP31995 323 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 PHBP35232 272 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 MAGEA3P43357 314 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 P2RY1P47900 373 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 MAGOHP61326 146 aaKnown RBP4.26□□□□□ -1.73
RTF1-204ENST00000558117 FGF12P61328 243 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 SRPXP78539 464 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 CDK16Q00536 496 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 UQCC3Q6UW78 93 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 TMIGD1Q6UXZ0 262 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 LINC00523Q86TU6 105 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 CALHM3Q86XJ0 350 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 C4orf33Q8N1A6 199 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 CLEC4FQ8N1N0 589 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 TCAIMQ8N3R3 496 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 LINC00612Q8N6U2 182 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 TTLQ8NG68 377 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 OR4C13Q8NGP0 309 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 DCAKDQ8WVC6 231 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 SLC38A4Q969I6 547 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 C18orf15Q96N68 181 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 ALKBH3Q96Q83 286 aaPredicted RBP4.26□□□□□ -1.73
RTF1-204ENST00000558117 RBBP8Q99708 897 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 ST6GALNAC5Q9BVH7 336 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 ROGDIQ9GZN7 287 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 NOX3Q9HBY0 568 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 SDHAF3Q9NRP4 125 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 MRPL22Q9NWU5 206 aaKnown RBP4.26□□□□□ -1.73
RTF1-204ENST00000558117 AHSPQ9NZD4 102 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 CFL2Q9Y281 166 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 RHBDD3Q9Y3P4 386 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 TIMM10BQ9Y5J6 103 aa4.26□□□□□ -1.73
RTF1-204ENST00000558117 RPL37AP8A6NKH3 93 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 FAM159BA6NKW6 160 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 BCL2L11O43521 198 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 H6PDO95479 791 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 ECDO95905 644 aaPredicted RBP4.25□□□□□ -1.73
RTF1-204ENST00000558117 STAG3L2P0CL84 134 aa4.25□□□□□ -1.73
RTF1-204ENST00000558117 INAFM2P0DMQ5 153 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms