RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PAX2Q02962 417 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 PAX8Q06710 450 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 IL13RA2Q14627 380 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 SSX1Q16384 188 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 LYPD6Q86Y78 171 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 C19orf18Q8NEA5 215 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 TMEM203Q969S6 136 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 GAFA1Q96PS6 74 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 SPACA5Q96QH8 159 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 MRI1Q9BV20 369 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 IFT22Q9H7X7 185 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 CTSZQ9UBR2 303 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 INSIG2Q9Y5U4 225 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 IGKV1-12A0A0C4DH73 117 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A10PA6NDY2 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A18PA6NE21 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A16PA6NEW6 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A20PA6NIJ5 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A8PA6NJQ4 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A7PA6NKC0 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A22PA8MWA6 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A12PA8MX19 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A5PA8MXJ8 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A23PA8MXZ1 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 PLATP00750 562 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 IGKV1D-12P01611 117 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 MAS1P04201 325 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A15PP0C7V4 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A13PP0C7W8 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A14PP0C7W9 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM90A24PP0C7X0 464 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 GTF2F2P13984 249 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 AMY2BP19961 511 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 BCL3P20749 454 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 CFPP27918 469 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 NPBWR2P48146 333 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 KCNJ3P48549 501 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 RPS25P62851 125 aaKnown RBP11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FABP5Q01469 135 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAM189A2Q15884 450 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 CR1LQ2VPA4 569 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 CHRFAM7AQ494W8 412 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 C1orf100Q5SVJ3 147 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAHD2BQ6P2I3 314 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-234ENST00000557703 TPRA1Q86W33 373 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 JAGN1Q8N5M9 183 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 LY6G5BQ8NDX9 201 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 OR5T2Q8NGG2 359 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 MUL1Q969V5 352 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 FAHD2AQ96GK7 314 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 NUDT16L1Q9BRJ7 211 aaKnown RBP11.36□□□□□ -0.59
SHMT2-234ENST00000557703 DCTN5Q9BTE1 182 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 NCOR1P1Q9H4R4 102 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 SPACA1Q9HBV2 294 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 EXOSC4Q9NPD3 245 aaKnown RBP11.36□□□□□ -0.59
SHMT2-234ENST00000557703 RPUSD1Q9UJJ7 312 aaKnown RBP11.36□□□□□ -0.59
SHMT2-234ENST00000557703 STUB1Q9UNE7 303 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 SSR3Q9UNL2 185 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 MAB21L2Q9Y586 359 aa11.36□□□□□ -0.59
SHMT2-234ENST00000557703 hCG_1809904A0A1W2PP81 198 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 A0A1W2PPE2 198 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 A0A1W2PPK0 400 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 A0A1W2PR64 198 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 A0A1W2PRV1 198 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 PHF1O43189 567 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-234ENST00000557703 CRLF1O75462 422 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 BPNT1O95861 308 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 HAND1O96004 215 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 TK1P04183 234 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 CSN2P05814 226 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 SFTPBP07988 381 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 PRKACAP17612 351 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 MYL9P24844 172 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 ERP29P30040 261 aaKnown RBP11.35□□□□□ -0.59
SHMT2-234ENST00000557703 GP2P55259 537 aaKnown RBP11.35□□□□□ -0.59
SHMT2-234ENST00000557703 GMFBP60983 142 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 SEC61A1P61619 476 aaKnown RBP11.35□□□□□ -0.59
SHMT2-234ENST00000557703 PAX5Q02548 391 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 DGUOKQ16854 277 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 MPV17LQ2QL34 196 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 FAM120AOSQ5T036 256 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 BTN2A1Q7KYR7 527 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 LRRTM1Q86UE6 522 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 CMTM4Q8IZR5 234 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 OR8H2Q8N162 312 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 OSR2Q8N2R0 312 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 KIR3DL3Q8N743 410 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 OR5D18Q8NGL1 313 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 OR6M1Q8NGM8 313 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 ST8SIA4Q92187 359 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 RFT1Q96AA3 541 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 SEH1LQ96EE3 360 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 ZNF488Q96MN9 340 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 BEX2Q9BXY8 128 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 FAM192AQ9GZU8 254 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 CST11Q9H112 138 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 C7orf69Q9H7B7 122 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 CNTD2Q9H8S5 307 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 LPAR2Q9HBW0 351 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 RBFOX1Q9NWB1 397 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms