RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ONECUT1Q9UBC0 465 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 CUBNO60494 3623 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 TRBV5-5A0A0J9YX44 114 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 A0A1W2PPH5 198 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 A0A1W2PQ09 198 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 RNF212BA8MTL3 300 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 F8VVB4 439 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 F8VWA3 439 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 KDM4BO94953 1096 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 INMTO95050 263 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 TK1P04183 234 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 IGHV4-38-2P0DP08 117 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 TMEM225BP0DP42 221 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 CELP19835 753 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 BCL3P20749 454 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 NPBWR2P48146 333 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 BMXP51813 675 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 HILS1P60008 231 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 COL10A1Q03692 680 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 SPIN3Q5JUX0 258 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 RBM48Q5RL73 367 aaKnown RBP10.3□□□□□ -0.76
SLIRP-211ENST00000557623 C9orf139Q6ZV77 190 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 OR5D13Q8NGL4 314 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 C22orf15Q8WYQ4 148 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 SPACA5Q96QH8 159 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 TBX15Q96SF7 602 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 GPER1Q99527 375 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 Q9H521 79 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 DUSP21Q9H596 190 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 TMEM138Q9NPI0 162 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 TAS2R4Q9NYW5 299 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 CKLFQ9UBR5 152 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 ZNF69Q9UC07 566 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 BLOC1S6Q9UL45 172 aa10.3□□□□□ -0.76
SLIRP-211ENST00000557623 IGHV3OR16-10A0A075B7F0 116 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 PNMA8CA0A1B0GUJ8 204 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 K7N7A8 449 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 M0R1W7 72 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 RGS10O43665 173 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 ANGPTL7O43827 346 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 HAND1O96004 215 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 SFTPBP07988 381 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 PRKACAP17612 351 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 CRHBPP24387 322 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 CEBPDP49716 269 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-211ENST00000557623 RPS11P62280 158 aaKnown RBP eCLIP10.29□□□□□ -0.76
SLIRP-211ENST00000557623 ZNF146Q15072 292 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 SPHARQ15513 63 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 C1orf122Q6ZSJ8 110 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 VMO1Q7Z5L0 202 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 SATL1Q86VE3 508 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 FAM185AQ8N0U4 392 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 ASCC1Q8N9N2 400 aaKnown RBP10.29□□□□□ -0.76
SLIRP-211ENST00000557623 PXT1Q8NFP0 134 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 OR51A2Q8NGJ7 313 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 OR5D18Q8NGL1 313 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 OR13C5Q8NGS8 318 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 PPP1R35Q8TAP8 253 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 ZFAND2BQ8WV99 257 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 SNX22Q96L94 193 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 MDFIQ99750 246 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 ELL3Q9HB65 397 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-211ENST00000557623 HMG20AQ9NP66 347 aa10.29□□□□□ -0.76
SLIRP-211ENST00000557623 RBFOX1Q9NWB1 397 aaKnown RBP10.29□□□□□ -0.76
SLIRP-211ENST00000557623 PAK1IP1Q9NWT1 392 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-211ENST00000557623 RRP15Q9Y3B9 282 aaKnown RBP10.29□□□□□ -0.76
SLIRP-211ENST00000557623 IGKV1-12A0A0C4DH73 117 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 CENPVL3A0A0U1RRI6 287 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 TRIM77I1YAP6 450 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 SH2D1BO14796 132 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 GPX5O75715 221 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 VENTXO95231 258 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 IGKV1D-12P01611 117 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 FSTP19883 344 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 MAPK3P27361 379 aaPredicted RBP10.28□□□□□ -0.76
SLIRP-211ENST00000557623 BDKRB2P30411 391 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 MTNR1BP49286 362 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 ZP1P60852 638 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 RPL31P62899 125 aaKnown RBP10.28□□□□□ -0.76
SLIRP-211ENST00000557623 IRF3Q14653 427 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 MED22Q15528 200 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 DDI2Q5TDH0 399 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 CRIP3Q6Q6R5 217 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 METAP1DQ6UB28 335 aaPredicted RBP10.28□□□□□ -0.76
SLIRP-211ENST00000557623 GDPD3Q7L5L3 318 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 PRSS48Q7RTY5 328 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 MS4A15Q8N5U1 240 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 OR52N4Q8NGI2 321 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 LHX4Q969G2 390 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 ZNF184Q99676 751 aaPredicted RBP10.28□□□□□ -0.76
SLIRP-211ENST00000557623 EXOSC4Q9NPD3 245 aaKnown RBP10.28□□□□□ -0.76
SLIRP-211ENST00000557623 FOXJ3Q9UPW0 622 aa10.28□□□□□ -0.76
SLIRP-211ENST00000557623 TRBV5-7A0A0A0MS05 114 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 IGHV1-69DA0A0B4J2H0 117 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 hCG_1809904A0A1W2PP81 198 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 A0A1W2PPE2 198 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 A0A1W2PR64 198 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 A0A1W2PRV1 198 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 GABRPO00591 440 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms