RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SFRP2Q96HF1 295 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SLC35E1Q96K37 410 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR8B4Q96RC9 309 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 VAT1Q99536 393 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 CMSS1Q9BQ75 279 aaKnown RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF670Q9BS34 389 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ULBP1Q9BZM6 244 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 NKX6-2Q9C056 277 aaPredicted RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 LIME1Q9H400 295 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ZDHHC11Q9H8X9 412 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 MRPL22Q9NWU5 206 aaKnown RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 IFNKQ9P0W0 207 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 VPS29Q9UBQ0 182 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 RNF14Q9UBS8 474 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SEC14L3Q9UDX4 400 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF221Q9UK13 617 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 FBXO5Q9UKT4 447 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 C5P01031 1676 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SHPRHQ149N8 1683 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 KIF21BO75037 1637 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ALKQ9UM73 1620 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 SBF2Q86WG5 1849 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 NLRC5Q86WI3 1866 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 A0A1B0GTH9 108 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 NKX2-6A6NCS4 301 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 K7ERI5 159 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 BHLHE40O14503 412 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ICOSLGO75144 302 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 GGCTO75223 188 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ETHE1O95571 254 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 IGHV3-23P01764 117 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ORM1P02763 201 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 CD55P08174 381 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 P0C879 139 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TDGF1P13385 188 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 HIST1H1CP16403 213 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 NAPAP54920 295 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 BIDP55957 195 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR4D2P58180 307 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 PFN3P60673 137 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 RPL8P62917 257 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TLE4Q04727 773 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 SRYQ05066 204 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 C2orf80Q0P641 193 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR2F1Q13607 317 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ATXN7L3Q14CW9 347 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 RBM48Q5RL73 367 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 CPTPQ5TA50 214 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OGFRL1Q5TC84 451 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 SDHAF4Q5VUM1 108 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 RNASEKQ6P5S7 137 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM205Q6UW68 189 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 LANCL3Q6ZV70 420 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 DPY19L4Q7Z388 723 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 HSD17B13Q7Z5P4 300 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TMED4Q7Z7H5 227 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 FUNDC1Q8IVP5 155 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 LINC00612Q8N6U2 182 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR51S1Q8NGJ8 323 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR5L2Q8NGL0 311 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 OR8U1Q8NH10 309 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 HAVCR2Q8TDQ0 301 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ASB13Q8WXK3 278 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 C12orf43Q96C57 262 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 MRPS24Q96EL2 167 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 FCRL1Q96LA6 429 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF75AQ96N20 296 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TGM7Q96PF1 710 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 RBP7Q96R05 134 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 C20orf144Q9BQM9 153 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 APOOQ9BUR5 198 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 RIOK2Q9BVS4 552 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ROGDIQ9GZN7 287 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 NHEJ1Q9H9Q4 299 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 CACYBPQ9HB71 228 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 MRPL27Q9P0M9 148 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 COPZ2Q9P299 210 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 PCYOX1Q9UHG3 505 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF346Q9UL40 294 aaKnown RBP1.26□□□□□ -2.21
HIF1A-212ENST00000557538 SSR3Q9UNL2 185 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ANGPT4Q9Y264 503 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 STYXL1Q9Y6J8 313 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 UNC79Q9P2D8 2635 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 BTAF1O14981 1849 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ASTN1O14525 1302 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 MYH10P35580 1976 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 IQGAP1P46940 1657 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ADGBQ8N7X0 1667 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 VWDEQ8N2E2 1590 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 TONSLQ96HA7 1378 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 A0A0A6YYD5 115 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 A0A0B4J2E0 115 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 A0A1B0GX12 115 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF726A6NNF4 738 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 DHRS7CA6NNS2 312 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 C5orf58C9J3I9 102 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 G3V3Q6 166 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 H0Y980 276 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 H0YL77 283 aa1.26□□□□□ -2.21
HIF1A-212ENST00000557538 J3QLI3 93 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms