RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DNAAF1Q8NEP3 725 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 WFDC9Q8NEX5 89 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 OR8J3Q8NGG0 315 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 OR5T2Q8NGG2 359 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 OR2AJ1Q8NGZ0 328 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 OCC1Q8TAD7 63 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 PIFOQ8TCI5 191 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 WIPF2Q8TF74 440 aaPredicted RBP4.73□□□□□ -1.65
VPS33B-207ENST00000557470 GLMPQ8WWB7 406 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 ST8SIA2Q92186 375 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 SGK3Q96BR1 496 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 C12orf43Q96C57 262 aaKnown RBP4.73□□□□□ -1.65
VPS33B-207ENST00000557470 NMNAT3Q96T66 252 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 NKX3-1Q99801 234 aaPredicted RBP4.73□□□□□ -1.65
VPS33B-207ENST00000557470 FAM234AQ9H0X4 552 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 METTL8Q9H825 291 aaKnown RBP4.73□□□□□ -1.65
VPS33B-207ENST00000557470 DIABLOQ9NR28 239 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 PTTG2Q9NZH5 202 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 CYB5R1Q9UHQ9 305 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 B9D1Q9UPM9 204 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 A0A1W2PRX2 142 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 FAM220BPB1ANY3 271 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 B5MCH6 92 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 ANGPTL7O43827 346 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 GMNNO75496 209 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 HOXB5P09067 269 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 SLC2A1P11166 492 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 PSKH1P11801 424 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 NDUFB7P17568 137 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 OTX1P32242 354 aaPredicted RBP4.72□□□□□ -1.65
VPS33B-207ENST00000557470 RPS27P42677 84 aaKnown RBP4.72□□□□□ -1.65
VPS33B-207ENST00000557470 HAAOP46952 286 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 PRRX1P54821 245 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 PDZK1IP1Q13113 114 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 AANATQ16613 207 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 DGUOKQ16854 277 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 SLC36A3Q495N2 470 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 CXorf66Q5JRM2 361 aaPredicted RBP4.72□□□□□ -1.65
VPS33B-207ENST00000557470 CGB2Q6NT52 195 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 ACSM6Q6P461 480 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF600Q6ZNG1 722 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 DPY19L4Q7Z388 723 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 PAPD5Q8NDF8 572 aaKnown RBP4.72□□□□□ -1.65
VPS33B-207ENST00000557470 SETD9Q8NE22 299 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 OR2T12Q8NG77 320 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 OR1M1Q8NGA1 313 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 OR9Q1Q8NGQ5 310 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 OR8S1Q8NH09 359 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF671Q8TAW3 534 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 ENKURQ8TC29 256 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 RNASE8Q8TDE3 154 aaKnown RBP4.72□□□□□ -1.65
VPS33B-207ENST00000557470 SPTSSAQ969W0 71 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 SPSB1Q96BD6 273 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 DUS3LQ96G46 650 aaKnown RBP4.72□□□□□ -1.65
VPS33B-207ENST00000557470 TMEM68Q96MH6 324 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 ERMAPQ96PL5 475 aaPredicted RBP4.72□□□□□ -1.65
VPS33B-207ENST00000557470 GAFA1Q96PS6 74 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 OR5M11Q96RB7 305 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 DDOQ99489 341 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 BCL7BQ9BQE9 202 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 ABHD6Q9BV23 337 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 CDCA4Q9BXL8 241 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 MEGF9Q9H1U4 602 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 WDR13Q9H1Z4 485 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 FN3KQ9H479 309 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 PPP1R3EQ9H7J1 279 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 ELL3Q9HB65 397 aaPredicted RBP4.72□□□□□ -1.65
VPS33B-207ENST00000557470 C12orf4Q9NQ89 552 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 MRPL22Q9NWU5 206 aaKnown RBP4.72□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF391Q9UJN7 358 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 MRPS7Q9Y2R9 242 aaKnown RBP4.72□□□□□ -1.65
VPS33B-207ENST00000557470 TENM2Q9NT68 2774 aa4.72□□□□□ -1.65
VPS33B-207ENST00000557470 TRBV4-1A0A0J9YWV2 114 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 OR6C68A6NDL8 312 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 UNC119BA6NIH7 251 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 NKX6-3A6NJ46 265 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 ANKRD30BLA7E2S9 258 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 CDIPTO14735 213 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 MRASO14807 208 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 SIGLEC5O15389 551 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF682O95780 498 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 CRYZL1O95825 349 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 RENP00797 406 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 HLA-DQA2P01906 255 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 HIST1H1CP16403 213 aaKnown RBP4.71□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF182P17025 639 aaPredicted RBP4.71□□□□□ -1.66
VPS33B-207ENST00000557470 NAA10P41227 235 aaPredicted RBP4.71□□□□□ -1.66
VPS33B-207ENST00000557470 OMPP47874 163 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 GSK3BP49841 420 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 CAV3P56539 151 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 SLC35A2P78381 396 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 KLF10Q13118 480 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 DGCR6Q14129 220 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 VWC2Q2TAL6 325 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 GAGE13Q4V321 117 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 FGD3Q5JSP0 725 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 SMARCD3Q6STE5 483 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 DRAM2Q6UX65 266 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF788Q6ZQV5 615 aa4.71□□□□□ -1.66
VPS33B-207ENST00000557470 MOB3CQ70IA8 216 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms