RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 A0A1B0GUS0 222 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF99A8MXY4 864 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 DISC1C4P0D8 188 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 NPIPB9F8W1W9 429 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SMLR1H3BR10 107 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 CLDN34H7C241 214 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 M0R233 179 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 WNT9BO14905 357 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 CYB5BO43169 146 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 PPIHO43447 177 aaKnown RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 ADAM20O43506 726 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SYNGR3O43761 229 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SSNA1O43805 119 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 TBX19O60806 448 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 RAMP3O60896 148 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 MPZL1O95297 269 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SERPINA1P01009 418 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 IGF2P01344 180 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 IGLV1-44P01699 117 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 HTR1AP08908 422 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 CECR9P0C854 216 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 HLA-GP17693 338 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SERPINA2P20848 420 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 UCP1P25874 307 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 EPHA3P29320 983 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 GNRHRP30968 328 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 CD200P41217 278 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 MNDAP41218 407 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 RRAS2P62070 204 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 PPP3R1P63098 170 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SLC35A1P78382 337 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 BDH1Q02338 343 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 EMX2Q04743 252 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 ZP4Q12836 540 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 HNRNPA0Q13151 305 aaKnown RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SNTB2Q13425 540 aaKnown RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SLC17A1Q14916 467 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 PEA15Q15121 130 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 RSU1Q15404 277 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 RAB11BQ15907 218 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 PSG3Q16557 428 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 UNC50Q53HI1 259 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 GPR157Q5UAW9 335 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 TMEM236Q5W0B7 351 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 PLCXD3Q63HM9 321 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SAXO2Q658L1 398 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 NOXRED1Q6NXP6 359 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 WDR88Q6ZMY6 472 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 DPY19L2P2Q6ZN68 376 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SLC35D2Q76EJ3 337 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 AAED1Q7RTV5 226 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 NRARPQ7Z6K4 114 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 PDZD9Q8IXQ8 264 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 DEFB107AQ8IZN7 70 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 PUSL1Q8N0Z8 303 aaKnown RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 MTURNQ8N3F0 131 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 DHRSXQ8N5I4 330 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 PARP16Q8N5Y8 322 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SIGLECL1Q8N7X8 197 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF614Q8N883 585 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 OR10W1Q8NGF6 305 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 OR4D6Q8NGJ1 314 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 OR9Q1Q8NGQ5 310 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 OR1K1Q8NGR3 316 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 OR11L1Q8NGX0 322 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 OR5R1Q8NH85 324 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 XAGE5Q8WWM1 108 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 CACNG8Q8WXS5 425 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 RORBQ92753 470 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 BCL2L2Q92843 193 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 ERGIC1Q969X5 290 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SLC25A28Q96A46 364 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 TMEM45BQ96B21 275 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 BPIFA2Q96DR5 249 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SAT2Q96F10 170 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 AURKBQ96GD4 344 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SAMD8Q96LT4 415 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 TSNAXQ99598 290 aaKnown RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 ATG101Q9BSB4 218 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 PRDM13Q9H4Q3 707 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 WDR55Q9H6Y2 383 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF665Q9H7R5 613 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SMURF2Q9HAU4 748 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 RHOFQ9HBH0 211 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 USE1Q9NZ43 259 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 TMEM181Q9P2C4 612 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 SLC17A7Q9P2U7 560 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 CHRNA9Q9UGM1 479 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 TBC1D24Q9ULP9 559 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 PSG11Q9UQ72 335 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 STRAPQ9Y3F4 350 aaKnown RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 CMAHPQ9Y471 501 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 TBL2Q9Y4P3 447 aaKnown RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 CCL27Q9Y4X3 112 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 RBM7Q9Y580 266 aaKnown RBP4.12□□□□□ -1.75
ATXN3-247ENST00000557311 MMP24Q9Y5R2 645 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 FLVCR1Q9Y5Y0 555 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 LYVE1Q9Y5Y7 322 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 COX11Q9Y6N1 276 aa4.12□□□□□ -1.75
ATXN3-247ENST00000557311 TRRAPQ9Y4A5 3859 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms