RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 GAL3ST2Q9H3Q3 398 aa13.82□□□□□ -0.2
CHGA-206ENST00000556876 NOTCH3Q9UM47 2321 aa13.82□□□□□ -0.2
CHGA-206ENST00000556876 FAM90A22PA8MWA6 464 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 RPP14O95059 124 aaKnown RBP13.81□□□□□ -0.2
CHGA-206ENST00000556876 HAND1O96004 215 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 CD28P10747 220 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 FCGR1AP12314 374 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 GABRR1P24046 479 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 RAB13P51153 203 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 ZNF146Q15072 292 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 UBE2V2Q15819 145 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 GRK1Q15835 563 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 PLA1AQ53H76 456 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 TMEM244Q5VVB8 128 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 CCBE1Q6UXH8 406 aaPredicted RBP13.81□□□□□ -0.2
CHGA-206ENST00000556876 Q6ZPA2 131 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 SLC25A26Q70HW3 274 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 MRAPQ8TCY5 172 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 STMN2Q93045 179 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 IL4I1Q96RQ9 567 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 OSBPL10Q9BXB5 764 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 CADM1Q9BY67 442 aaKnown RBP13.81□□□□□ -0.2
CHGA-206ENST00000556876 LIN7BQ9HAP6 207 aa13.81□□□□□ -0.2
CHGA-206ENST00000556876 IGHV2-26A0A0B4J1V2 119 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 TRBV2A0A0J9YWF9 115 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 A6NIN4 97 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 SH2D1BO14796 132 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 DUS4LO95620 317 aaKnown RBP13.8□□□□□ -0.2
CHGA-206ENST00000556876 OCM2P0CE71 109 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 OCMP0CE72 109 aaPredicted RBP13.8□□□□□ -0.2
CHGA-206ENST00000556876 FASP25445 335 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 PAX6P26367 422 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 CEACAM3P40198 252 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 RASSF2P50749 326 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 EDDM3AQ14507 147 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 ATP6AP1Q15904 470 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 KDM4DQ6B0I6 523 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 LHFPL2Q6ZUX7 228 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 UTS2BQ765I0 119 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 TMEM219Q86XT9 240 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 FAM58AQ8N1B3 248 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 DYNAPQ8N1N2 210 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 OR8J1Q8NGP2 316 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 SLAMF9Q96A28 289 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 SPSB1Q96BD6 273 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 CITED2Q99967 270 aaPredicted RBP13.8□□□□□ -0.2
CHGA-206ENST00000556876 MMP28Q9H239 520 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 DPM3Q9P2X0 92 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 HILPDAQ9Y5L2 63 aa13.8□□□□□ -0.2
CHGA-206ENST00000556876 TRGV10A0A0A0MS01 117 aa13.79□□□□□ -0.2
CHGA-206ENST00000556876 A0A1W2PQL4 384 aaPredicted RBP13.79□□□□□ -0.2
CHGA-206ENST00000556876 M0QZK8 103 aa13.79□□□□□ -0.2
CHGA-206ENST00000556876 CLIC3O95833 236 aa13.79□□□□□ -0.2
CHGA-206ENST00000556876 CD33P20138 364 aa13.79□□□□□ -0.2
CHGA-206ENST00000556876 MTCP1P56278 107 aa13.79□□□□□ -0.2
CHGA-206ENST00000556876 CENPVQ7Z7K6 275 aaPredicted RBP13.79□□□□□ -0.2
CHGA-206ENST00000556876 TRAPPC6BQ86SZ2 158 aa13.79□□□□□ -0.2
CHGA-206ENST00000556876 OR5AU1Q8NGC0 362 aa13.79□□□□□ -0.2
CHGA-206ENST00000556876 TRUB1Q8WWH5 349 aaKnown RBP13.79□□□□□ -0.2
CHGA-206ENST00000556876 GABARAPL1Q9H0R8 117 aa13.79□□□□□ -0.2
CHGA-206ENST00000556876 TAS2R3Q9NYW6 316 aa13.79□□□□□ -0.2
CHGA-206ENST00000556876 TMEM82A0PJX8 343 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 LEUTXA8MZ59 168 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 MAGEB4O15481 346 aaPredicted RBP13.78□□□□□ -0.2
CHGA-206ENST00000556876 PF4V1P10720 104 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 P2RX3P56373 397 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 CD83Q01151 205 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 BDH1Q02338 343 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 ZNF91Q05481 1191 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 HABP2Q14520 560 aaPredicted RBP13.78□□□□□ -0.2
CHGA-206ENST00000556876 OXLD1Q5BKU9 147 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 CCDC144NLQ6NUI1 221 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 BCDIN3DQ7Z5W3 292 aaKnown RBP13.78□□□□□ -0.2
CHGA-206ENST00000556876 BATF2Q8N1L9 274 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 OR10H4Q8NGA5 316 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 CORO2AQ92828 525 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 MRPL48Q96GC5 212 aaKnown RBP13.78□□□□□ -0.2
CHGA-206ENST00000556876 OCSTAMPQ9BR26 566 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 GPR61Q9BZJ8 451 aa13.78□□□□□ -0.2
CHGA-206ENST00000556876 TSSC4Q9Y5U2 329 aaPredicted RBP13.78□□□□□ -0.2
CHGA-206ENST00000556876 OOSP1A8MZH6 123 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 ISG15P05161 165 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 ZNF20P17024 532 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 PRRX1P54821 245 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 BLCAPP62952 87 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 KPNB1Q14974 876 aaKnown RBP13.77□□□□□ -0.21
CHGA-206ENST00000556876 ODF4Q2M2E3 257 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 HEPN1Q6WQI6 88 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 ABHD12Q8N2K0 398 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 CHST4Q8NCG5 386 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 OR4X2Q8NGF9 303 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 TBX5Q99593 518 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 EXOSC4Q9NPD3 245 aaKnown RBP13.77□□□□□ -0.21
CHGA-206ENST00000556876 PCDHB16Q9NRJ7 776 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 AP4S1Q9Y587 144 aa13.77□□□□□ -0.21
CHGA-206ENST00000556876 IGKV1-27A0A075B6S5 117 aa13.76□□□□□ -0.21
CHGA-206ENST00000556876 LOC107986453A0A1B0GWG9 222 aa13.76□□□□□ -0.21
CHGA-206ENST00000556876 SNTNA6NMZ2 147 aa13.76□□□□□ -0.21
CHGA-206ENST00000556876 F8VVB4 439 aa13.76□□□□□ -0.21
CHGA-206ENST00000556876 F8VWA3 439 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms