RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 ALPLP05186 524 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 BRS3P32247 399 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 ERVK11-1P61568 191 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 ESRRGP62508 458 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 SLC35D3Q5M8T2 416 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 UNQ9370/PRO34162Q6UXP9 181 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 RNF144BQ7Z419 303 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 ANGPTL5Q86XS5 388 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 CPOQ8IVL8 374 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 ZNF676Q8N7Q3 588 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 OR51D1Q8NGF3 324 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 SNX22Q96L94 193 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 MCRIP2Q9BUT9 160 aaKnown RBP10.1□□□□□ -0.79
SHMT2-223ENST00000556689 CLEC7AQ9BXN2 247 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 YIPF3Q9GZM5 350 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 GPR173Q9NS66 373 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 ZMAT5Q9UDW3 170 aaKnown RBP10.1□□□□□ -0.79
SHMT2-223ENST00000556689 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.1□□□□□ -0.79
SHMT2-223ENST00000556689 SESN1Q9Y6P5 492 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 ZNF737O75373 536 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 ZNF254O75437 659 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 HMGN1P05114 100 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 OSMP13725 252 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 PRKACGP22612 351 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 CD24P25063 80 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 MPZP25189 248 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 RPS7P62081 194 aaKnown RBP10.09□□□□□ -0.79
SHMT2-223ENST00000556689 GINS1Q14691 196 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 TMEM42Q69YG0 159 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 KDM4DQ6B0I6 523 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 C10orf99Q6UWK7 81 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 TMEM179BQ7Z7N9 219 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 MRPL41Q8IXM3 137 aaKnown RBP10.09□□□□□ -0.79
SHMT2-223ENST00000556689 HS3ST5Q8IZT8 346 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 OR8H2Q8N162 312 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 SETD9Q8NE22 299 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 ZNF184Q99676 751 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-223ENST00000556689 APOL4Q9BPW4 351 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 SLC25A33Q9BSK2 321 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 TMEM133Q9H2Q1 129 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 IMPAD1Q9NX62 359 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 DPM3Q9P2X0 92 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 U3KQK5 164 aa10.09□□□□□ -0.79
SHMT2-223ENST00000556689 ARHGDIBP52566 201 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 CDC42P60953 191 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 IL24Q13007 206 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 EDDM3AQ14507 147 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 ZNF829Q3KNS6 432 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-223ENST00000556689 TTC23Q5W5X9 447 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 TCF23Q7RTU1 214 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 ZNF679Q8IYX0 411 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 OSR2Q8N2R0 312 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 DHRSXQ8N5I4 330 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 CYGBQ8WWM9 190 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 RBM14Q96PK6 669 aaKnown RBP10.08□□□□□ -0.8
SHMT2-223ENST00000556689 ZNF649Q9BS31 505 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 GABARAPL3Q9BY60 117 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 PKIBQ9C010 78 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 NUFIP1Q9UHK0 495 aaKnown RBP10.08□□□□□ -0.8
SHMT2-223ENST00000556689 LINC00312Q9Y6C7 94 aa10.08□□□□□ -0.8
SHMT2-223ENST00000556689 A6NIN4 97 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 OR2F2O95006 317 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 TTRP02766 147 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 AMY1AP04745 511 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 AMY2AP04746 511 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 CCDC159P0C7I6 412 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 LMO1P25800 156 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 THBS3P49746 956 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 DAPP51397 102 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 RIDAP52758 137 aaKnown RBP10.07□□□□□ -0.8
SHMT2-223ENST00000556689 AQP4P55087 323 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 ROM1Q03395 351 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 APOFQ13790 326 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 C9orf152Q5JTZ5 239 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 ABHD12Q8N2K0 398 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 BBS1Q8NFJ9 593 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 OR4P4Q8NGL7 312 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 ZNF596Q8TC21 504 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 ASB17Q8WXJ9 295 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 CEP19Q96LK0 163 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 GTF2A1LQ9UNN4 478 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 SLC7A11Q9UPY5 501 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 TMEM14AQ9Y6G1 99 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 V9GYS6 101 aa10.07□□□□□ -0.8
SHMT2-223ENST00000556689 FAM230AA0A1W2PPH8 454 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 TMEM82A0PJX8 343 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 PSMB11A5LHX3 300 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 SH2D7A6NKC9 451 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-223ENST00000556689 LEUTXA8MZ59 168 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 F8VVB4 439 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 F8VWA3 439 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 C3orf84H3BNL1 204 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 M0QZK8 103 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 MPZL2O60487 215 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 SLC2A5P22732 501 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 CAPGP40121 348 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 CRISP1P54107 249 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 DGCR2P98153 550 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 CDK5Q00535 292 aa10.06□□□□□ -0.8
SHMT2-223ENST00000556689 BDH1Q02338 343 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms