RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 FCER2P06734 321 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 TUBG1P23258 451 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 UCNP55089 124 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 DHODHQ02127 395 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 RELQ04864 619 aaPredicted RBP7.59□□□□□ -1.19
TDP1-210ENST00000554976 PSG7Q13046 419 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 AADACL3Q5VUY0 350 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 LAMTOR1Q6IAA8 161 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 OR2T2Q6IF00 324 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 BPIFB2Q8N4F0 458 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 ZDHHC22Q8N966 263 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 OR52B4Q8NGK2 314 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 OR51F2Q8NH61 342 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 TUBG2Q9NRH3 451 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 CA10Q9NS85 328 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 GLS2Q9UI32 602 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 OSGIN2Q9Y236 505 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 INTS1Q8N201 2190 aaKnown RBP7.59□□□□□ -1.19
TDP1-210ENST00000554976 A8MXE2 369 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 ZNF732B4DXR9 585 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 GATCO43716 136 aaKnown RBP7.59□□□□□ -1.19
TDP1-210ENST00000554976 SYNGR1O43759 233 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 HTR3BO95264 441 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 ACAA1P09110 424 aaPredicted RBP7.59□□□□□ -1.19
TDP1-210ENST00000554976 C2orf68Q2NKX9 166 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 TIMM23BQ5SRD1 257 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 SPATA46Q5T0L3 261 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 Q6ZS49 121 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 KLF14Q8TD94 323 aaPredicted RBP7.59□□□□□ -1.19
TDP1-210ENST00000554976 S100PBPQ96BU1 408 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 RADILQ96JH8 1075 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 HDHD3Q9BSH5 251 aaPredicted RBP7.59□□□□□ -1.19
TDP1-210ENST00000554976 RHOFQ9HBH0 211 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 CNTRLQ7Z7A1 2325 aa7.59□□□□□ -1.2
TDP1-210ENST00000554976 MLNRO43193 412 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 AMY2AP04746 511 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 FAM87AP0C7U9 286 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 DTYMKP23919 212 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 GABRR1P24046 479 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 SRSF7Q16629 238 aaKnown RBP eCLIP7.58□□□□□ -1.2
TDP1-210ENST00000554976 ACTBL2Q562R1 376 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 Q6ZR03 302 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 SLC25A26Q70HW3 274 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 OVCH2Q7RTZ1 564 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 C11orf53Q8IXP5 236 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 FBXL14Q8N1E6 418 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 CISD2Q8N5K1 135 aaKnown RBP7.58□□□□□ -1.2
TDP1-210ENST00000554976 RELL2Q8NC24 303 aaPredicted RBP7.58□□□□□ -1.2
TDP1-210ENST00000554976 SLAMF9Q96A28 289 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 DMRTA2Q96SC8 542 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 PIGMQ9H3S5 423 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 HES4Q9HCC6 221 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 DLL4Q9NR61 685 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 PCDHB16Q9NRJ7 776 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 IL36RNQ9UBH0 155 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 ZNF230Q9UIE0 474 aaPredicted RBP7.58□□□□□ -1.2
TDP1-210ENST00000554976 CNOT1A5YKK6 2376 aaKnown RBP7.58□□□□□ -1.2
TDP1-210ENST00000554976 CUL9Q8IWT3 2517 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 OR2A4O95047 310 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 PMP2P02689 132 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 FCGR3AP08637 254 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 NKX6-1P78426 367 aaPredicted RBP7.58□□□□□ -1.2
TDP1-210ENST00000554976 SRSF4Q08170 494 aaKnown RBP7.58□□□□□ -1.2
TDP1-210ENST00000554976 ARL6IP1Q15041 203 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 TAF9Q16594 264 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 SLC25A42Q86VD7 318 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 OR13G1Q8NGZ3 307 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 OR4K15Q8NH41 348 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 ST8SIA2Q92186 375 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 OR2A7Q96R45 310 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 PRRT1Q99946 306 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 FAAP24Q9BTP7 215 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 MED28Q9H204 178 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 OR51B6Q9H340 312 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 LIME1Q9H400 295 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 BEX1Q9HBH7 125 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 CDH20Q9HBT6 801 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 SLC23A1Q9UHI7 598 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 ST3GAL6Q9Y274 331 aa7.58□□□□□ -1.2
TDP1-210ENST00000554976 DISC1C4P0D8 188 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 H0YL77 283 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 SMLR1H3BR10 107 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 DLL1O00548 723 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 PDCD6O75340 191 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 PTBP3O95758 552 aaKnown RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 PLATP00750 562 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 ZP3P21754 424 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 CA6P23280 308 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 ZBTB25P24278 435 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 LINC00596Q86U02 117 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 COMMD7Q86VX2 200 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 MUC20Q8N307 709 aaPredicted RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 FTMTQ8N4E7 242 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 ARRDC1Q8N5I2 433 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 KDF1Q8NAX2 398 aaPredicted RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 ZNF680Q8NEM1 530 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 OR1J1Q8NGS3 322 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 TMEM230Q96A57 120 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 WDR89Q96FK6 387 aaPredicted RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 S100A13Q99584 98 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms