RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 APCDD1LQ8NCL9 501 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 OR6K3Q8NGY3 331 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 OR51Q1Q8NH59 317 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 KLF14Q8TD94 323 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-213ENST00000554776 TMEM239Q8WW34 195 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 IFT81Q8WYA0 676 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 CCDC124Q96CT7 223 aaKnown RBP1.68□□□□□ -2.14
SCFD1-213ENST00000554776 ZMYND19Q96E35 227 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-213ENST00000554776 LINC01587Q99440 93 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 SEC22CQ9BRL7 303 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 BBS2Q9BXC9 721 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 ABCB9Q9NP78 766 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 TAS2R13Q9NYV9 303 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 DNAJC27Q9NZQ0 273 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 TRIP11Q15643 1979 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 A0A1B0GXF2 115 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 IZUMO1RA6ND01 250 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 F8VP50 259 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-213ENST00000554776 ISLRO14498 428 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 FFAR1O14842 300 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 RGS5O15539 181 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 COX7A2P2O60397 106 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 NDUFS6O75380 124 aaKnown RBP1.67□□□□□ -2.14
SCFD1-213ENST00000554776 TNFAIP8O95379 198 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 RD3LP0DJH9 198 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 NQO2P16083 231 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 TEAD1P28347 426 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 S100A2P29034 98 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 IMPA1P29218 277 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 CASQ1P31415 396 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 MPIP34949 423 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 IDH2P48735 452 aaKnown RBP1.67□□□□□ -2.14
SCFD1-213ENST00000554776 TGM4P49221 684 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 RAB38P57729 211 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 RAB25P57735 213 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 PRKCDQ05655 676 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 BNIP2Q12982 314 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 ANGPT1Q15389 498 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 TRIP13Q15645 432 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-213ENST00000554776 PSG3Q16557 428 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 ZNF404Q494X3 552 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 Q499Y3 187 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 UBE2NLQ5JXB2 153 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 CLLU1OSQ5K130 101 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 PRR9Q5T870 116 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 C16orf47Q6ZP98 133 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-213ENST00000554776 TMEM136Q6ZRR5 245 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 GALNT10Q86SR1 603 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 CYP4Z1Q86W10 505 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 SYCE1Q8N0S2 351 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 ZFP62Q8NB50 900 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-213ENST00000554776 OR2Y1Q8NGV0 311 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 OR1P1Q8NH06 330 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 UBA3Q8TBC4 463 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 NELFBQ8WX92 580 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 CCL17Q92583 94 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 PPP1R36Q96LQ0 422 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 ANAPC13Q9BS18 74 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 RTBDNQ9BSG5 229 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-213ENST00000554776 PLA2G12AQ9BZM1 189 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 ULBP1Q9BZM6 244 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 SLC25A31Q9H0C2 315 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 FBXL15Q9H469 300 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 VSIRQ9H7M9 311 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 IL37Q9NZH6 218 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 MAT2BQ9NZL9 334 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 SNX24Q9Y343 169 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 THADAQ6YHU6 1953 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 DYSFO75923 2080 aa1.67□□□□□ -2.14
SCFD1-213ENST00000554776 PLXNB3Q9ULL4 1909 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 IGKV1D-17A0A075B6S4 117 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 KIR2DS1A0A191URI9 304 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 HSBP1L1C9JCN9 74 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 M0QX08 132 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 SULT1C2O00338 296 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 CDIPTO14735 213 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 SGCEO43556 437 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 MYO1DO94832 1006 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 IGKV1-17P01599 117 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 IGHV1-46P01743 117 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 IGLV7-43P04211 117 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 PFN1P07737 140 aaKnown RBP1.66□□□□□ -2.14
SCFD1-213ENST00000554776 SYT1P21579 422 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 SLC6A1P30531 599 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 LGALS7P47929 136 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 KCNJ3P48549 501 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 OR10A3P58181 314 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 TSPAN5P62079 268 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 FMODQ06828 376 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 IL15RAQ13261 267 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 LINC00303Q3SY05 128 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 ZNF470Q6ECI4 717 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 ERICH5Q6P6B1 374 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 TPGS1Q6ZTW0 290 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 TRMT10CQ7L0Y3 403 aaKnown RBP1.66□□□□□ -2.14
SCFD1-213ENST00000554776 TMEM144Q7Z5S9 345 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 MARCH3Q86UD3 253 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 LRRC6Q86X45 466 aa1.66□□□□□ -2.14
SCFD1-213ENST00000554776 C10orf107Q8IVU9 208 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms