RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 TBCCD1Q9NVR7 557 aa4.93□□□□□ -1.62
ATXN3-230ENST00000554673 BEX4Q9NWD9 120 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-230ENST00000554673 MRPL15Q9P015 296 aaKnown RBP4.93□□□□□ -1.62
ATXN3-230ENST00000554673 ABRACLQ9P1F3 81 aa4.93□□□□□ -1.62
ATXN3-230ENST00000554673 DUX4Q9UBX2 424 aa4.93□□□□□ -1.62
ATXN3-230ENST00000554673 ANKHD1Q8IWZ3 2542 aaKnown RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 ZNF462Q96JM2 2506 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 IGLV3-9A0A075B6K5 115 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 TRGV8A0A0C4DH27 118 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 DHRS7CA6NNS2 312 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 IQCF6A8MYZ5 107 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 EEF1E1-BLOC1S5C9J1V9 151 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 E7EQL1 145 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 F5H5P2 479 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 RGS5O15539 181 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 EEF1E1O43324 174 aaKnown RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 GSTZ1O43708 216 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 ORC5O43913 435 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 CDC14BO60729 498 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 ZG16O60844 167 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 NOL3O60936 208 aaKnown RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 PTBP3O95758 552 aaKnown RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 PLATP00750 562 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 PI3P19957 117 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 BCL3P20749 454 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 CA6P23280 308 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 IL32P24001 234 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 MPZP25189 248 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 PTGFRP43088 359 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 CEBPDP49716 269 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 ZNF134P52741 427 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 UCP2P55851 309 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 FAM3BP58499 235 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 PCBD1P61457 104 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 BSPH1Q075Z2 132 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 RAB11BQ15907 218 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 ST3GAL2Q16842 350 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 FAM76BQ5HYJ3 339 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 UBE2NLQ5JXB2 153 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 TIMM23BQ5SRD1 257 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 FAM201AQ5SY85 155 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 PRAMEF6Q5VXH4 476 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 Q6P435 159 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 GLIPR1L1Q6UWM5 242 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 PAMR1Q6UXH9 720 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 MOB3CQ70IA8 216 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 NRARPQ7Z6K4 114 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 FJX1Q86VR8 437 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 LRRC28Q86X40 367 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 ZNF843Q8N446 348 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 JAGN1Q8N5M9 183 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 SEMA6DQ8NFY4 1073 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 OR10AD1Q8NGE0 317 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 OR52H1Q8NGJ2 320 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 OR6M1Q8NGM8 313 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 ZNF671Q8TAW3 534 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 GPX8Q8TED1 209 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 SMIM4Q8WVI0 70 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 NUDCD2Q8WVJ2 157 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 PIGCQ92535 297 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 ITFG2Q969R8 447 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 SPTSSAQ969W0 71 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 APOBEC3DQ96AK3 386 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 UPRTQ96BW1 309 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 RBMXL1Q96E39 390 aaKnown RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 ZC3HAV1LQ96H79 300 aaKnown RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 PAPOLGQ9BWT3 736 aaKnown RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 TM2D1Q9BX74 207 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 WDR13Q9H1Z4 485 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 SP140LQ9H930 580 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 MSL2Q9HCI7 577 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 GCM1Q9NP62 436 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 RBFOX1Q9NWB1 397 aaKnown RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 KLK11Q9UBX7 282 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 PURGQ9UJV8 347 aaKnown RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 MRPS28Q9Y2Q9 187 aaKnown RBP4.92□□□□□ -1.62
ATXN3-230ENST00000554673 CACNG2Q9Y698 323 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 TENM4Q6N022 2769 aa4.92□□□□□ -1.62
ATXN3-230ENST00000554673 AKAP6Q13023 2319 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 CHD6Q8TD26 2715 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 ZNF816-ZNF321PA0A0X1KG74 233 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 LINC00854A0A1B0GVQ3 168 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 FAM230AA0A1W2PPH8 454 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 CLEC18AA5D8T8 446 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 TMEM235A6NFC5 223 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 FABP12A6NFH5 140 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 GGT3PA6NGU5 568 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 ANXA2P2A6NMY6 339 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 ZNF732B4DXR9 585 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 B5MCH6 92 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 M0R1B8 84 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 CCL21O00585 134 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 CTDSPLO15194 276 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 XRCC3O43542 346 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 FARS2O95363 451 aaKnown RBP4.91□□□□□ -1.62
ATXN3-230ENST00000554673 NRASP01111 189 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 MELTFP08582 738 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 SELLP14151 372 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 ZNF250P15622 560 aa4.91□□□□□ -1.62
ATXN3-230ENST00000554673 RAB3AP20336 220 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms