RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SCAND1P57086 179 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 OR12D2P58182 307 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 LSM6P62312 80 aaKnown RBP7.36□□□□□ -1.23
TDP1-208ENST00000553989 SRSF4Q08170 494 aaKnown RBP7.36□□□□□ -1.23
TDP1-208ENST00000553989 IKZF1Q13422 519 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 CRMP1Q14194 572 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 CDK5R1Q15078 307 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 RUSC1-AS1Q66K80 236 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 DNM1P34Q6PK57 102 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 FBXW12Q6X9E4 464 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 BTN2A1Q7KYR7 527 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 SLC35F2Q8IXU6 374 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 BOLLQ8N9W6 283 aaKnown RBP7.36□□□□□ -1.23
TDP1-208ENST00000553989 GJC3Q8NFK1 279 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 OR56B4Q8NH76 319 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 TRMT10AQ8TBZ6 339 aaKnown RBP7.36□□□□□ -1.23
TDP1-208ENST00000553989 WFDC12Q8WWY7 111 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 SMIM19Q96E16 107 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 S100A16Q96FQ6 103 aaKnown RBP7.36□□□□□ -1.23
TDP1-208ENST00000553989 FYTTD1Q96QD9 318 aaKnown RBP7.36□□□□□ -1.23
TDP1-208ENST00000553989 GPX7Q96SL4 187 aaPredicted RBP7.36□□□□□ -1.23
TDP1-208ENST00000553989 DDOQ99489 341 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 MED20Q9H944 212 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 PLEKHA1Q9HB21 404 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 UFSP2Q9NUQ7 469 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 ATPIF1Q9UII2 106 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 ZNF281Q9Y2X9 895 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 MMP24Q9Y5R2 645 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 IER3IP1Q9Y5U9 82 aa7.36□□□□□ -1.23
TDP1-208ENST00000553989 A0A0G2JK05 382 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 KIR2DS1A0A191URI9 304 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 SHISA3A0PJX4 238 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 IQCF6A8MYZ5 107 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 E9PI62 339 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 F5H5K5 113 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 MLNRO43193 412 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 ZNF780AO75290 641 aaPredicted RBP7.35□□□□□ -1.23
TDP1-208ENST00000553989 TXNDC12O95881 172 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 H2AFB2P0C5Z0 115 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 CALCBP10092 127 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 MNDAP41218 407 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 BLVRAP53004 296 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 PAX2Q02962 417 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 MALLQ13021 153 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 FHL1Q13642 323 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 OR8B8Q15620 311 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 MEP1BQ16820 701 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 CEP78Q5JTW2 689 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 UBE2NLQ5JXB2 153 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 PRAMEF6Q5VXH4 476 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 WDR25Q64LD2 544 aaPredicted RBP7.35□□□□□ -1.23
TDP1-208ENST00000553989 OLFML2AQ68BL7 652 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 GPR139Q6DWJ6 353 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 CORO6Q6QEF8 472 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 LYPD2Q6UXB3 125 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 SLC16A9Q7RTY1 509 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 FAM122BQ7Z309 247 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 SCCPDHQ8NBX0 429 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 ANGPTL6Q8NI99 470 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 ZNF671Q8TAW3 534 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 PGLYRP3Q96LB9 341 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 ABHD1Q96SE0 405 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 TBX5Q99593 518 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 CHIAQ9BZP6 476 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 NMNAT2Q9BZQ4 307 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 OR51J1Q9H342 316 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 GHITMQ9H3K2 345 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 NOX4Q9NPH5 578 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 TMEM14AQ9Y6G1 99 aa7.35□□□□□ -1.23
TDP1-208ENST00000553989 A0A0B4J293 547 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 CLPSL1A2RUU4 121 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 C22orf46C9J442 243 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 TIMM23O14925 209 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 TOX4O94842 621 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 HLA-DQA2P01906 255 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 LCATP04180 440 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 EIF4EP06730 217 aaKnown RBP7.34□□□□□ -1.23
TDP1-208ENST00000553989 SFTPBP07988 381 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 ANXA3P12429 323 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 CRABP1P29762 137 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 CFHR2P36980 270 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 NPY4RP50391 375 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 CCR9P51686 369 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 BPIFB3P59826 476 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 PDCD1Q15116 288 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 OR8G1Q15617 311 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 METTL11BQ5VVY1 283 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 SFRP4Q6FHJ7 346 aaPredicted RBP7.34□□□□□ -1.23
TDP1-208ENST00000553989 Q6YL49 198 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 PGAP1Q75T13 922 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 KRT74Q7RTS7 529 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 MRPL21Q7Z2W9 205 aaKnown RBP7.34□□□□□ -1.23
TDP1-208ENST00000553989 LINC00346Q8IVM7 164 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 OR6V1Q8N148 313 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 OR2AJ1Q8NGZ0 328 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 OR4K13Q8NH42 304 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 RPS4Y2Q8TD47 263 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 ZNF431Q8TF32 576 aaPredicted RBP7.34□□□□□ -1.23
TDP1-208ENST00000553989 FCAMRQ8WWV6 532 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 PELI1Q96FA3 418 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms