RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 GPR157Q5UAW9 335 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 ZNF788Q6ZQV5 615 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 SLC25A26Q70HW3 274 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 SATL1Q86VE3 508 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 PRR18Q8N4B5 295 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 ZNF561Q8N587 486 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 FAM216BQ8N7L0 139 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 TBC1D15Q8TC07 691 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 NRG4Q8WWG1 115 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 EMG1Q92979 244 aaKnown RBP6.92□□□□□ -1.3
PSEN1-209ENST00000553855 SLAMF9Q96A28 289 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 SMIM19Q96E16 107 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 PCGF1Q9BSM1 259 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 KRTAP4-6Q9BYQ5 205 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 CCDC90BQ9GZT6 254 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 FGF23Q9GZV9 251 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-209ENST00000553855 CNTD2Q9H8S5 307 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 ELL3Q9HB65 397 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-209ENST00000553855 PCDHB16Q9NRJ7 776 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 C19orf73Q9NVV2 129 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 ONECUT1Q9UBC0 465 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 CTSZQ9UBR2 303 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 NUP50Q9UKX7 468 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 RAB26Q9ULW5 256 aa6.92□□□□□ -1.3
PSEN1-209ENST00000553855 CHD3Q12873 2000 aaKnown RBP6.92□□□□□ -1.3
PSEN1-209ENST00000553855 TLN2Q9Y4G6 2542 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 hCG_1809904A0A1W2PP81 198 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 A0A1W2PPE2 198 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 A0A1W2PR64 198 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 A0A1W2PRV1 198 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 ZNF879B4DU55 563 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 E9PI62 339 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 OGG1O15527 345 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 RGS10O43665 173 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 TOX4O94842 621 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 CDK1P06493 297 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 MYF6P23409 242 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 EEF1B2P24534 225 aaKnown RBP6.91□□□□□ -1.3
PSEN1-209ENST00000553855 MAPK3P27361 379 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-209ENST00000553855 BMXP51813 675 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 CAV3P56539 151 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 BPIFB3P59826 476 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 FGF12P61328 243 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 HOXA4Q00056 320 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-209ENST00000553855 PAX8Q06710 450 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 YIF1BQ5BJH7 314 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 ZNF841Q6ZN19 808 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 CALHM1Q8IU99 346 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 LYSMD2Q8IV50 215 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 FAM185AQ8N0U4 392 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 PARP16Q8N5Y8 322 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 ASCC1Q8N9N2 400 aaKnown RBP6.91□□□□□ -1.3
PSEN1-209ENST00000553855 OR51A4Q8NGJ6 313 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 OR5D13Q8NGL4 314 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 ANGPTL6Q8NI99 470 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 GHSRQ92847 366 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 TMEM106AQ96A25 262 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 SEH1LQ96EE3 360 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 CNBD2Q96M20 576 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 ZNF488Q96MN9 340 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 GAFA1Q96PS6 74 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 NRIP2Q9BQI9 281 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 ZNF649Q9BS31 505 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 ANKRD60Q9BZ19 345 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 RHOFQ9HBH0 211 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 CLEC2DQ9UHP7 191 aa6.91□□□□□ -1.3
PSEN1-209ENST00000553855 RPUSD1Q9UJJ7 312 aaKnown RBP6.91□□□□□ -1.3
PSEN1-209ENST00000553855 NSD1Q96L73 2696 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-209ENST00000553855 TRAV40A0A0B4J280 105 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 PNMA8CA0A1B0GUJ8 204 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 FUOMA2VDF0 154 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 RNF212BA8MTL3 300 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-209ENST00000553855 TRIM77I1YAP6 450 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 TNFRSF13BO14836 293 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-209ENST00000553855 PRKACAP17612 351 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 CELP19835 753 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 C21orf33P30042 268 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-209ENST00000553855 ARF6P62330 175 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 BDH1Q02338 343 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 PDZK1IP1Q13113 114 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 MED22Q15528 200 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 Q499Y3 187 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 RBM48Q5RL73 367 aaKnown RBP6.9□□□□□ -1.3
PSEN1-209ENST00000553855 RNLSQ5VYX0 342 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 GDPD3Q7L5L3 318 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 OVCH2Q7RTZ1 564 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 PRIMA1Q86XR5 153 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 SAXO1Q8IYX7 474 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 FAM58AQ8N1B3 248 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 BATF2Q8N1L9 274 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 MS4A15Q8N5U1 240 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 NANOGP1Q8N7R0 232 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 ZNRF1Q8ND25 227 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 OR10AC1Q8NH08 325 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 RFT1Q96AA3 541 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 UPRTQ96BW1 309 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 SDSLQ96GA7 329 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 WDFY2Q96P53 400 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 DCTN5Q9BTE1 182 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms