RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 OR11L1Q8NGX0 322 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 OTOSQ8NHW6 89 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 ZNF420Q8TAQ5 688 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-222ENST00000553570 ST7LQ8TDW4 575 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 TMED6Q8WW62 240 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 ASB17Q8WXJ9 295 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 FAM71F1Q96KD3 344 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-222ENST00000553570 LYZL4Q96KX0 146 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 Q96MT0 163 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 OR2V2Q96R30 315 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 BPESC1Q9GZL8 116 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 KCNK15Q9H427 330 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 MYOZ1Q9NP98 299 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-222ENST00000553570 TUBG2Q9NRH3 451 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 FAM118AQ9NWS6 357 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 WARS2Q9UGM6 360 aaKnown RBP3.92□□□□□ -1.78
ATXN3-222ENST00000553570 GNG8Q9UK08 70 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 KLHDC2Q9Y2U9 406 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 TMEM14AQ9Y6G1 99 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 CELSR1Q9NYQ6 3014 aa3.92□□□□□ -1.78
ATXN3-222ENST00000553570 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.92□□□□□ -1.784e-12■■■□□ 18.3
ATXN3-222ENST00000553570 ABCA2Q9BZC7 2435 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 IGHV4-61A0A0C4DH41 118 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 A0A1W2PQL4 384 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-222ENST00000553570 CCDC182A6NF36 153 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 METTL15A6NJ78 407 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 LRRC30A6NM36 301 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 ZNF850A8MQ14 1090 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 IQCF6A8MYZ5 107 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 LOC110117498-PIK3R3F6TDL0 507 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 J3QR06 171 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 NDUFS8O00217 210 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 P2RY10O00398 339 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 PHYHO14832 338 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 CLIC3O95833 236 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 PRSS2P07478 247 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 TACSTD2P09758 323 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 OR2T7P0C7T2 308 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 OCM2P0CE71 109 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 OCMP0CE72 109 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-222ENST00000553570 ALOX5APP20292 161 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 KITLGP21583 273 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 ACHEP22303 614 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 HTR1FP30939 366 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 IL2RGP31785 369 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 ELF3P78545 371 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-222ENST00000553570 SLC3A1Q07837 685 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 LOXL1Q08397 574 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-222ENST00000553570 MZT1Q08AG7 82 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 UBE2V1Q13404 147 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 OR8B8Q15620 311 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 TMEM249Q2WGJ8 235 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 ZNF829Q3KNS6 432 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-222ENST00000553570 TP53I3Q53FA7 332 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 KLHL22Q53GT1 634 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 TMEM255AQ5JRV8 349 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 BCL2L15Q5TBC7 163 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 AADACL4Q5VUY2 407 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 PRAMEF6Q5VXH4 476 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 RUSC1-AS1Q66K80 236 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 FAHD2BQ6P2I3 314 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-222ENST00000553570 CSPG4Q6UVK1 2322 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 FBXW12Q6X9E4 464 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 IL17RELQ6ZVW7 336 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 FAM220AQ7Z4H9 259 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 ZNF679Q8IYX0 411 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 OR56B2PQ8NGI1 322 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 OR52H1Q8NGJ2 320 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 OR2T27Q8NH04 317 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 OR51E1Q8TCB6 317 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 RNF133Q8WVZ7 376 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 TRUB1Q8WWH5 349 aaKnown RBP3.91□□□□□ -1.78
ATXN3-222ENST00000553570 FAHD2AQ96GK7 314 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 RNF170Q96K19 258 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 MBOAT4Q96T53 435 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 GAL3ST1Q99999 423 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 PAPOLGQ9BWT3 736 aaKnown RBP3.91□□□□□ -1.78
ATXN3-222ENST00000553570 BEX2Q9BXY8 128 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 GABARAPL3Q9BY60 117 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 PBOV1Q9GZY1 135 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 MMP27Q9H306 513 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 VCXQ9H320 206 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 DCLRE1BQ9H816 532 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 NIPAL2Q9H841 368 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 MARCH7Q9H992 704 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 ADGRL4Q9HBW9 690 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 C1orf123Q9NWV4 160 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 SMPD3Q9NY59 655 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-222ENST00000553570 USE1Q9NZ43 259 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 IL19Q9UHD0 177 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 ATPIF1Q9UII2 106 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.91□□□□□ -1.78
ATXN3-222ENST00000553570 COPS3Q9UNS2 423 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 PIGLQ9Y2B2 252 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 NAV3Q8IVL0 2385 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 CSMD2Q7Z408 3487 aa3.91□□□□□ -1.78
ATXN3-222ENST00000553570 TLN2Q9Y4G6 2542 aa3.9□□□□□ -1.78
ATXN3-222ENST00000553570 IGLV5-37A0A075B6J1 123 aa3.9□□□□□ -1.79
ATXN3-222ENST00000553570 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
ATXN3-222ENST00000553570 PPIAL4EA0A075B759 164 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms