RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 SMIM17P0DL12 118 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 GALR1P47211 349 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 TNFAIP6P98066 277 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-208ENST00000553289 DHRS13Q6UX07 377 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 FA2HQ7L5A8 372 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 C1orf210Q8IVY1 113 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 NOL4LQ96MY1 436 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-208ENST00000553289 SLC26A1Q9H2B4 701 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 ESRP2Q9H6T0 727 aaKnown RBP10.2□□□□□ -0.78
SYNE2-208ENST00000553289 THYN1Q9P016 225 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 FAM24AA6NFZ4 105 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 C21orf140B9A014 251 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 KLK10O43240 276 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 LANCL1O43813 399 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 CA11O75493 328 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 CEACAM3P40198 252 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 OPRK1P41145 380 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 CD200P41217 278 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 INPP5JQ15735 1006 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-208ENST00000553289 MPV17LQ2QL34 196 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 LINC00596Q86U02 117 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 MYPOPQ86VE0 399 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-208ENST00000553289 CXorf67Q86X51 503 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-208ENST00000553289 PTP4A1Q93096 173 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 MANBALQ9NQG1 85 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 GOLT1BQ9Y3E0 138 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 ZNF785A8K8V0 405 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 ZNF737O75373 536 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 MPZL1O95297 269 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 GZMMP51124 257 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 FAM109BQ6ICB4 259 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-208ENST00000553289 MRPL22Q9NWU5 206 aaKnown RBP10.2□□□□□ -0.78
SYNE2-208ENST00000553289 TCRBV16S1A1N1A0A5B0 115 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 PNPP00491 289 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 BGLAPP02818 100 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 COX19Q49B96 90 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 ZNF66Q6ZN08 573 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 SLC25A42Q86VD7 318 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 PTX4Q96A99 478 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 SH2D2AQ9NP31 389 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 CRHP06850 196 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 KRTDAPP60985 99 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 PDCD1Q15116 288 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 SIGIRRQ6IA17 410 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 WDR73Q6P4I2 378 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 RNF133Q8WVZ7 376 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 FAM117AQ9C073 453 aa10.2□□□□□ -0.78
SYNE2-208ENST00000553289 SMCHD1A6NHR9 2005 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 OOEPA6NGQ2 149 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 NQO2P16083 231 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 VDAC1P21796 283 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 GNG4P50150 75 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 TMEM33P57088 247 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 GGTLC2Q14390 218 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 TMPRSS13Q9BYE2 586 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 MIXL1Q9H2W2 232 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 WDR54Q9H977 334 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 LPAR3Q9UBY5 353 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 HLA-GP17693 338 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 MMP16P51512 607 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-208ENST00000553289 OR10G4Q8NGN3 311 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 OR10G9Q8NGN4 311 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 OR10G7Q8NGN6 311 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 CT55Q8WUE5 264 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 IL36GQ9NZH8 169 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 TCFL5Q9UL49 500 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 SDHBP21912 280 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 FCER1GP30273 86 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 KIR2DL1P43626 348 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-208ENST00000553289 OR3A1P47881 315 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 CLEC18BQ6UXF7 455 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 ATP5SQ99766 215 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 VAMP8Q9BV40 100 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 TMEM167BQ9NRX6 74 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 RBP4P02753 201 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 TMIGD3P0DMS9 266 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-208ENST00000553289 EIF4EBP2Q13542 120 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-208ENST00000553289 CLEC9AQ6UXN8 241 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 GVQW1Q8N7I0 195 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 ZBTB34Q8NCN2 500 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 WDR13Q9H1Z4 485 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 LYRM2Q9NU23 88 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-208ENST00000553289 ONECUT1Q9UBC0 465 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 MMP24Q9Y5R2 645 aa10.19□□□□□ -0.78
SYNE2-208ENST00000553289 SYNGR2O43760 224 aa10.18□□□□□ -0.78
SYNE2-208ENST00000553289 OPN1MWP04001 364 aa10.18□□□□□ -0.78
SYNE2-208ENST00000553289 OPN1MW2P0DN77 364 aa10.18□□□□□ -0.78
SYNE2-208ENST00000553289 OPN1MW3P0DN78 364 aa10.18□□□□□ -0.78
SYNE2-208ENST00000553289 GNG10P50151 68 aa10.18□□□□□ -0.78
SYNE2-208ENST00000553289 HLA-DRB3P79483 266 aa10.18□□□□□ -0.78
SYNE2-208ENST00000553289 ETFDHQ16134 617 aa10.18□□□□□ -0.78
SYNE2-208ENST00000553289 Q56UQ5 140 aa10.18□□□□□ -0.78
SYNE2-208ENST00000553289 PTPMT1Q8WUK0 201 aaPredicted RBP10.18□□□□□ -0.78
SYNE2-208ENST00000553289 TRAV38-1A0A0B4J264 116 aa10.18□□□□□ -0.78
SYNE2-208ENST00000553289 A0A1B0GTQ1 180 aa10.18□□□□□ -0.78
SYNE2-208ENST00000553289 NCBP2LA6PVI3 153 aaKnown RBP10.18□□□□□ -0.78
SYNE2-208ENST00000553289 SLC25A5P05141 298 aaKnown RBP10.18□□□□□ -0.78
SYNE2-208ENST00000553289 S100A4P26447 101 aaKnown RBP10.18□□□□□ -0.78
SYNE2-208ENST00000553289 CD82P27701 267 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms