RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CHID1Q9BWS9 393 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 PRSS22Q9GZN4 317 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 DNTTIP1Q9H147 329 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ABCB10Q9NRK6 738 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 RBFOX1Q9NWB1 397 aaKnown RBP5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ACTR3BQ9P1U1 418 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 BAIAP2Q9UQB8 552 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 HUWE1Q7Z6Z7 4374 aaKnown RBP5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 TRAV39A0A0B4J263 110 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 LINC01548A6NM66 108 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 J3QT63 122 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 K7N7A8 449 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 SIRPB1O00241 398 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 GNGT2O14610 69 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF737O75373 536 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 IGLV3-1P01715 115 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 AMY1AP04745 511 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 CHRM2P08172 466 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF728P0DKX0 622 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 T-ENOLP0DO92 83 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 PF4V1P10720 104 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 BCL3P20749 454 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 PAICSP22234 425 aaKnown RBP5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 GABRR1P24046 479 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 CXCR4P61073 352 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 GNGT1P63211 74 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 CDK5Q00535 292 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 CD83Q01151 205 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 SCN1BQ07699 218 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 DIAPH2-AS1Q14236 149 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 HNF4GQ14541 408 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 UBE2V2Q15819 145 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 SNAPC1Q16533 368 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 SMIM21Q3B7S5 101 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 FAM98BQ52LJ0 330 aaKnown RBP5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 HSP90B2PQ58FF3 399 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 C16orf89Q6UX73 402 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 ETV3LQ6ZN32 361 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 CENPVQ7Z7K6 275 aaPredicted RBP5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 Q8N2B8 174 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF676Q8N7Q3 588 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 OR14K1Q8NGZ2 314 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 RPS4Y2Q8TD47 263 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 CYYR1Q96J86 154 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 IL4I1Q96RQ9 567 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF649Q9BS31 505 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 RGCCQ9H4X1 137 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 RANBP3Q9H6Z4 567 aaPredicted RBP5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 USE1Q9NZ43 259 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 MRM2Q9UI43 246 aaKnown RBP5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 ENPP5Q9UJA9 477 aa5.45□□□□□ -1.54
PRPF40B-214ENST00000551320 DSCAML1Q8TD84 2053 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 IGHV2-26A0A0B4J1V2 119 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 A0A0U1RQV5 110 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 A0A1W2PPE3 182 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 VGLL3A8MV65 326 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 LOC110117498-PIK3R3F6TDL0 507 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 HSPB6O14558 160 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 XPNPEP2O43895 674 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 E2F6O75461 281 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 DHRS3O75911 302 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 APOC1P02654 83 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 OSMP13725 252 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 POLR2IP36954 125 aaKnown RBP5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 OR3A4PP47883 348 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 GLIPR1P48060 266 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 POU3F4P49335 361 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 DAPP51397 102 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 RIDAP52758 137 aaKnown RBP5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 OR12D2P58182 307 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 ERVK11-1P61568 191 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 EMX1Q04741 257 aaPredicted RBP5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 TRIM25Q14258 630 aaKnown RBP5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 RBM39Q14498 530 aaKnown RBP5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 GRK1Q15835 563 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 LTC4SQ16873 150 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 CLVS2Q5SYC1 327 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 BCL2L15Q5TBC7 163 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF626Q68DY1 528 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 LCN8Q6JVE9 175 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF322Q6U7Q0 402 aaPredicted RBP5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 CD300LDQ6UXZ3 194 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 SLC25A26Q70HW3 274 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 GDPD3Q7L5L3 318 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 TRAPPC6BQ86SZ2 158 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 EGFL6Q8IUX8 553 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 SLC35F2Q8IXU6 374 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 FTMTQ8N4E7 242 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF561Q8N587 486 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 OR4F17Q8NGA8 305 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 OR5D18Q8NGL1 313 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 OR10AC1Q8NH08 325 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 UBALD1Q8TB05 177 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 OR4F4Q96R69 305 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 THTPAQ9BU02 230 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF286AQ9HBT8 521 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 HES4Q9HCC6 221 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 H2AFY2Q9P0M6 372 aaPredicted RBP5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF581Q9P0T4 197 aa5.44□□□□□ -1.54
PRPF40B-214ENST00000551320 AASSQ9UDR5 926 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms