RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 OR8H2Q8N162 312 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 OR51E1Q8TCB6 317 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 TEAD3Q99594 435 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 OR51V1Q9H2C8 321 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 GORASP2Q9H8Y8 452 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 CMC2Q9NRP2 79 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 GPR173Q9NS66 373 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 ZFP57Q9NU63 452 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 FAM206AQ9NX38 181 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 LINC00527Q9UJ94 153 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 ENPP5Q9UJA9 477 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 LINC00312Q9Y6C7 94 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 STARD9Q9P2P6 4700 aa8.27□□□□□ -1.09
VPS29-208ENST00000550267 PQLC2LA1A4F0 135 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 FAM172BPA6NC97 362 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 F8VVB4 439 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 F8VWA3 439 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 M0QZK8 103 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 CCL24O00175 119 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 PSMD9O00233 223 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 TNFRSF11BO00300 401 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 IGLV3-1P01715 115 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 H2AFXP16104 143 aaPredicted RBP8.26□□□□□ -1.09
VPS29-208ENST00000550267 SLC6A1P30531 599 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 CBX1P83916 185 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 PPP1R8Q12972 351 aaKnown RBP8.26□□□□□ -1.09
VPS29-208ENST00000550267 PRAMEF5Q5TYX0 476 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 PLBD1Q6P4A8 553 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 KRT77Q7Z794 578 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 SBSPONQ8IVN8 264 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 ZNF695Q8IW36 515 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 ABHD12Q8N2K0 398 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 AQP11Q8NBQ7 271 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 SNX22Q96L94 193 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 CHST6Q9GZX3 395 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 PBOV1Q9GZY1 135 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 IL1RAPQ9NPH3 570 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 GPR84Q9NQS5 396 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 PAPOLBQ9NRJ5 636 aaKnown RBP8.26□□□□□ -1.09
VPS29-208ENST00000550267 MOB4Q9Y3A3 225 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 HSPE1-MOB4S4R3N1 261 aa8.26□□□□□ -1.09
VPS29-208ENST00000550267 TMEM269A0A1B0GVZ9 245 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 SERPINE3A8MV23 424 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 LEUTXA8MZ59 168 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 INMTO95050 263 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 CCNB2O95067 398 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 MPZP25189 248 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 ARHGDIBP52566 201 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 HMGA2P52926 109 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 HCCSP53701 268 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 BDH1Q02338 343 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 DEFB136Q30KP8 78 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 CLVS2Q5SYC1 327 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 TPTE2P1Q5T6R2 138 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 MEPCEQ7L2J0 689 aaKnown RBP8.25□□□□□ -1.09
VPS29-208ENST00000550267 EGFL6Q8IUX8 553 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 IQCF1Q8N6M8 205 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 OR52N4Q8NGI2 321 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 OR5M8Q8NGP6 311 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 CHPT1Q8WUD6 406 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 CDRT15Q96T59 188 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 SPAG4Q9NPE6 437 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 SCOCQ9UIL1 159 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 MAGEL2Q9UJ55 1249 aa8.25□□□□□ -1.09
VPS29-208ENST00000550267 HYDINQ4G0P3 5121 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 ARRDC5A6NEK1 342 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 A6NIN4 97 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 ACOD1A6NK06 481 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 SEC14L6B5MCN3 397 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 DHRS3O75911 302 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 KRT36O76013 467 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 LY86O95711 162 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 IGLV1-47P01700 117 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 ALOX5APP20292 161 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 PEX2P28328 305 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 IL24Q13007 206 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 GRK1Q15835 563 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 LCN1P1Q5VSP4 162 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 TMEM42Q69YG0 159 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 ADAMTSL5Q6ZMM2 481 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 TRAPPC6BQ86SZ2 158 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 RTN4RL2Q86UN3 420 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 TRMT10AQ8TBZ6 339 aaKnown RBP8.24□□□□□ -1.09
VPS29-208ENST00000550267 ZNF596Q8TC21 504 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 ITFG2Q969R8 447 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 Q96M66 194 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 NSMCE2Q96MF7 247 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 PKIBQ9C010 78 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 ZNF286AQ9HBT8 521 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 MTCH1Q9NZJ7 389 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 IL36RNQ9UBH0 155 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 LAMP5Q9UJQ1 280 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 ZNF256Q9Y2P7 627 aaPredicted RBP8.24□□□□□ -1.09
VPS29-208ENST00000550267 SMAD5-AS1Q9Y6J3 95 aa8.24□□□□□ -1.09
VPS29-208ENST00000550267 FAM230AA0A1W2PPH8 454 aa8.23□□□□□ -1.09
VPS29-208ENST00000550267 PRR23D1E9PI22 279 aaPredicted RBP8.23□□□□□ -1.09
VPS29-208ENST00000550267 LY6LH3BQJ8 138 aa8.23□□□□□ -1.09
VPS29-208ENST00000550267 BUB1B-PAK6H3BSN5 160 aa8.23□□□□□ -1.09
VPS29-208ENST00000550267 DLGAP1O14490 977 aa8.23□□□□□ -1.09
VPS29-208ENST00000550267 ARPC2O15144 300 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms