RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 IGKV1-27A0A075B6S5 117 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 J3QRE1 110 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 SH2D1BO14796 132 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 MGST3O14880 152 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 ENTPD6O75354 484 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 ALX3O95076 343 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 APOL3O95236 402 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 MT-ND2P03891 347 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 GABRR1P24046 479 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 AZGP1P25311 298 aaKnown RBP8.82□□□□□ -1
VTI1BP3-201ENST00000550220 EFNB2P52799 333 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 PDZK1IP1Q13113 114 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 IL18R1Q13478 541 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 GRK1Q15835 563 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 ZNF626Q68DY1 528 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 OR52W1Q6IF63 320 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 CRIP3Q6Q6R5 217 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 SAXO1Q8IYX7 474 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 RDH10Q8IZV5 341 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 PYDC1Q8WXC3 89 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 FGGYQ96C11 551 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 OPALINQ96PE5 141 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 INPP5EQ9NRR6 644 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 FRRS1LQ9P0K9 344 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 EXOGQ9Y2C4 368 aaKnown RBP8.82□□□□□ -1
VTI1BP3-201ENST00000550220 UBE2J1Q9Y385 318 aaPredicted RBP8.82□□□□□ -1
VTI1BP3-201ENST00000550220 SESN1Q9Y6P5 492 aa8.82□□□□□ -1
VTI1BP3-201ENST00000550220 TMEM82A0PJX8 343 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 ODF3BA8MYP8 253 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 F8VVB4 439 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 F8VWA3 439 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 EI24O14681 340 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 FADS2O95864 444 aaKnown RBP8.81□□□□□ -1
VTI1BP3-201ENST00000550220 ALDOBP05062 364 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 KIR3DL2P43630 455 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 POU3F4P49335 361 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 BMXP51813 675 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 ARHGDIBP52566 201 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 EMX1Q04741 257 aaPredicted RBP8.81□□□□□ -1
VTI1BP3-201ENST00000550220 ZNF91Q05481 1191 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 DYNC1I2Q13409 638 aaKnown RBP8.81□□□□□ -1
VTI1BP3-201ENST00000550220 SSX2Q16385 188 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 ZNF782Q6ZMW2 699 aaPredicted RBP8.81□□□□□ -1
VTI1BP3-201ENST00000550220 CCDC121Q6ZUS5 278 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 RTN4RL2Q86UN3 420 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 BATF2Q8N1L9 274 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 SYS1Q8N2H4 156 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 ZNF676Q8N7Q3 588 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 CHST4Q8NCG5 386 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 OR5D14Q8NGL3 314 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 PIFOQ8TCI5 191 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 CREB3L1Q96BA8 519 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 ADAT3Q96EY9 351 aaPredicted RBP8.81□□□□□ -1
VTI1BP3-201ENST00000550220 CPNE2Q96FN4 548 aaPredicted RBP8.81□□□□□ -1
VTI1BP3-201ENST00000550220 C9orf16Q9BUW7 83 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 GAL3ST2Q9H3Q3 398 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 HMG20AQ9NP66 347 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 EXOSC4Q9NPD3 245 aaKnown RBP8.81□□□□□ -1
VTI1BP3-201ENST00000550220 TCF19Q9Y242 345 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 GMPPBQ9Y5P6 360 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 MEGF8Q7Z7M0 2845 aa8.81□□□□□ -1
VTI1BP3-201ENST00000550220 TRGV10A0A0A0MS01 117 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 IGKV1-9A0A0C4DH69 117 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 TMEM212A6NML5 194 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 H3BSH0 61 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 J3QLW9 94 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 PEX14O75381 377 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 INMTO95050 263 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 DBTP11182 482 aaKnown RBP8.8□□□□□ -1
VTI1BP3-201ENST00000550220 ZNF19P17023 458 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 PRKACAP17612 351 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 LMO1P25800 156 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 RAB40BQ12829 278 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 ALKBH1Q13686 389 aaKnown RBP8.8□□□□□ -1
VTI1BP3-201ENST00000550220 GALEQ14376 348 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 EDDM3AQ14507 147 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 FAM189A2Q15884 450 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 LHFPL4Q7Z7J7 247 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 TRAPPC6BQ86SZ2 158 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 SERPINA12Q8IW75 414 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 Q8N2B8 174 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 CBR4Q8N4T8 237 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 OR13C3Q8NGS6 347 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 FAM110DQ8TAY7 271 aaPredicted RBP8.8□□□□□ -1
VTI1BP3-201ENST00000550220 CFHR4Q92496 578 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 RNF166Q96A37 237 aaPredicted RBP8.8□□□□□ -1
VTI1BP3-201ENST00000550220 AKR1E2Q96JD6 320 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 CLEC7AQ9BXN2 247 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 PRSS22Q9GZN4 317 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 COMMD4Q9H0A8 199 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 TMEM133Q9H2Q1 129 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 ZCCHC4Q9H5U6 513 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 RBFOX1Q9NWB1 397 aaKnown RBP8.8□□□□□ -1
VTI1BP3-201ENST00000550220 TAS2R3Q9NYW6 316 aa8.8□□□□□ -1
VTI1BP3-201ENST00000550220 RPL36Q9Y3U8 105 aaKnown RBP8.8□□□□□ -1
VTI1BP3-201ENST00000550220 A6NDX4 124 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 OR4C45A6NMZ5 311 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 E9PQ18 207 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 F2RL2O00254 374 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 MAGEB3O15480 346 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms