RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 SNX22Q96L94 193 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 CEP19Q96LK0 163 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 RDH12Q96NR8 316 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 APOL4Q9BPW4 351 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 OCSTAMPQ9BR26 566 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 TTTY10Q9BZA0 68 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 CLN6Q9NWW5 311 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 GTF2A1LQ9UNN4 478 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 LRRC42Q9Y546 428 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 LINC00312Q9Y6C7 94 aa10.33□□□□□ -0.76
PTCH1-218ENST00000548945 KMT2CQ8NEZ4 4911 aaKnown RBP10.32□□□□□ -0.76
PTCH1-218ENST00000548945 ZNF670-ZNF695F2Z2N8 137 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 PRKYO43930 277 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 GATBO75879 557 aaKnown RBP10.32□□□□□ -0.76
PTCH1-218ENST00000548945 ALPLP05186 524 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 CD33P20138 364 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 FUT6P51993 359 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 ACTA2P62736 377 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 BLCAPP62952 87 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 ACTG2P63267 376 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 ACTC1P68032 377 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 ACTA1P68133 377 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 EFNB1P98172 346 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 IL18R1Q13478 541 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 PTGES3Q15185 160 aaKnown RBP10.32□□□□□ -0.76
PTCH1-218ENST00000548945 FOXB2Q5VYV0 432 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 SLX4IPQ5VYV7 408 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 NXNL2Q5VZ03 156 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 FAHD1Q6P587 224 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 TCF23Q7RTU1 214 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 SLC35F2Q8IXU6 374 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 Q8IYB0 196 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 ENTHD1Q8IYW4 607 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 Q9H521 79 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 PLEKHA1Q9HB21 404 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 ADGRL4Q9HBW9 690 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 SMPD3Q9NY59 655 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-218ENST00000548945 MTCH1Q9NZJ7 389 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 H2AFY2Q9P0M6 372 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-218ENST00000548945 MRM2Q9UI43 246 aaKnown RBP10.32□□□□□ -0.76
PTCH1-218ENST00000548945 RAB26Q9ULW5 256 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 ORC6Q9Y5N6 252 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 SESN1Q9Y6P5 492 aa10.32□□□□□ -0.76
PTCH1-218ENST00000548945 IGHV2-26A0A0B4J1V2 119 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 FAM230AA0A1W2PPH8 454 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 F8VVB4 439 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 F8VWA3 439 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 AADACL4Q5VUY2 407 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 Q6ZS46 218 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 GID4Q8IVV7 300 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 BATF2Q8N1L9 274 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 ZNF676Q8N7Q3 588 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 OR5AU1Q8NGC0 362 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 TMEM163Q8TC26 289 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 C10orf35Q96D05 121 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 AKR1E2Q96JD6 320 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 OR5M11Q96RB7 305 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 CLEC7AQ9BXN2 247 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 CHST5Q9GZS9 411 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 TMEM133Q9H2Q1 129 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 LIN7BQ9HAP6 207 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 HILPDAQ9Y5L2 63 aa10.31□□□□□ -0.76
PTCH1-218ENST00000548945 IGKV1-27A0A075B6S5 117 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 TMEM82A0PJX8 343 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 A6NIN4 97 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 MAGEB4O15481 346 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-218ENST00000548945 KRT8P05787 483 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 PF4V1P10720 104 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 HTR1DP28221 377 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 ERP29P30040 261 aaKnown RBP10.3□□□□□ -0.76
PTCH1-218ENST00000548945 UBE2V2Q15819 145 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 KDM4DQ6B0I6 523 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 PLEKHG7Q6ZR37 379 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 CATSPERDQ86XM0 798 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 EGFL6Q8IUX8 553 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 NDNFQ8TB73 568 aa10.3□□□□□ -0.76
PTCH1-218ENST00000548945 TRMT10AQ8TBZ6 339 aaKnown RBP10.3□□□□□ -0.76
PTCH1-218ENST00000548945 UBE2J1Q9Y385 318 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-218ENST00000548945 TRBV2A0A0J9YWF9 115 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 MGST3O14880 152 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 SYT7O43581 403 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 SULT1C4O75897 302 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 DUS4LO95620 317 aaKnown RBP10.29□□□□□ -0.76
PTCH1-218ENST00000548945 HAND1O96004 215 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 SERPINA3P01011 423 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 IGLL1P15814 213 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 BRS3P32247 399 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 DAPP51397 102 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 ARHGDIBP52566 201 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 CDC42P60953 191 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 SLC35A2P78381 396 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 BDH1Q02338 343 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 ZNF91Q05481 1191 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 EDDM3AQ14507 147 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 ZNF146Q15072 292 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 GRK1Q15835 563 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 TMEM95Q3KNT9 176 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 SPIN3Q5JUX0 258 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 OR52W1Q6IF63 320 aa10.29□□□□□ -0.76
PTCH1-218ENST00000548945 SLC25A26Q70HW3 274 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms