RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 SPIN3Q5JUX0 258 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 Q6ZS49 121 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 SPICQ8N5J4 248 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 GVQW1Q8N7I0 195 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 SCCPDHQ8NBX0 429 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 OR4S1Q8NGB4 309 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 RADILQ96JH8 1075 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 DIRC2Q96SL1 478 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 RANBP3Q9H6Z4 567 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-215ENST00000547672 ZNF701Q9NV72 531 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-215ENST00000547672 TREM2Q9NZC2 230 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 NDRG3Q9UGV2 375 aa11.47□□□□□ -0.57
PTCH1-215ENST00000547672 ELF5Q9UKW6 265 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-215ENST00000547672 SPTBN2O15020 2390 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 KIR2DS1A0A191URI9 304 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 DEGS1O15121 323 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 PMP2P02689 132 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 GSTT2P0CG29 244 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 CALCRP30988 508 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 MPV17P39210 176 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 KIR2DS4P43632 304 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 NPBWR2P48146 333 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 IKZF1Q13422 519 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 KIR2DS1Q14954 304 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 MICBQ29980 383 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 C4orf46Q504U0 113 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 ZNF626Q68DY1 528 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 SIGIRRQ6IA17 410 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 OR52W1Q6IF63 320 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 FAAP20Q6NZ36 180 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 SLC36A1Q7Z2H8 476 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 OR4D10Q8NGI6 311 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 ZFAND1Q8TCF1 268 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 ST6GAL2Q96JF0 529 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 CHMP1AQ9HD42 196 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-215ENST00000547672 RCC2Q9P258 522 aaKnown RBP11.46□□□□□ -0.57
PTCH1-215ENST00000547672 AK3Q9UIJ7 227 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 ANXA10Q9UJ72 324 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 SH3BGRL2Q9UJC5 107 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 ZDHHC8Q9ULC8 765 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 FLVCR2Q9UPI3 526 aa11.46□□□□□ -0.57
PTCH1-215ENST00000547672 PTPRQQ9UMZ3 2332 aa11.46□□□□□ -0.58
PTCH1-215ENST00000547672 ANKRD11Q6UB99 2663 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-215ENST00000547672 CEACAM18A8MTB9 384 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 BOLA2-SMG1P6H3BVE0 249 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 CCL21O00585 134 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 SYNGR1O43759 233 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 NXPH2O95156 264 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 GRPP07492 148 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 PGA5P0DJD9 388 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 SULT1A3P0DMM9 295 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 SULT1A4P0DMN0 295 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 ERP29P30040 261 aaKnown RBP11.45□□□□□ -0.58
PTCH1-215ENST00000547672 CD200P41217 278 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 GLP1RP43220 463 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 ERVS71-1P61550 626 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 NKX6-1P78426 367 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-215ENST00000547672 CD83Q01151 205 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 ST3GAL2Q16842 350 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 NKPD1Q17RQ9 610 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 FBXL19-AS1Q494R0 122 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 PRR30Q53SZ7 412 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-215ENST00000547672 LIN54Q6MZP7 749 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 OVCH2Q7RTZ1 564 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 SLC25A42Q86VD7 318 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 FAM90A1Q86YD7 464 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 POC1AQ8NBT0 407 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 OR10Z1Q8NGY1 313 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 NEK7Q8TDX7 302 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 ZNF431Q8TF32 576 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-215ENST00000547672 ERGIC1Q969X5 290 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 NRIP2Q9BQI9 281 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 SULT4A1Q9BR01 284 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 TLNRD1Q9H1K6 362 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 ESRP2Q9H6T0 727 aaKnown RBP11.45□□□□□ -0.58
PTCH1-215ENST00000547672 SEBOXQ9HB31 216 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-215ENST00000547672 EHFQ9NZC4 300 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 ZNF69Q9UC07 566 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 DUSP13Q9UII6 198 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 ZNF222Q9UK12 451 aa11.45□□□□□ -0.58
PTCH1-215ENST00000547672 LILRA1O75019 489 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 C1QBP02746 253 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 CSN2P05814 226 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 FCGR3AP08637 254 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 OR4E1P0C645 316 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 ANXA7P20073 488 aaKnown RBP11.44□□□□□ -0.58
PTCH1-215ENST00000547672 CFHR2P36980 270 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 KCNJ3P48549 501 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 ERVK11-1P61568 191 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 ZNF154Q13106 437 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 ZNF146Q15072 292 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 MPPED2Q15777 294 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 SHEQ5VZ18 495 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 ALKBH2Q6NS38 261 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 LPCAT3Q6P1A2 487 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 DHRS11Q6UWP2 260 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 PEG10Q86TG7 708 aaKnown RBP11.44□□□□□ -0.58
PTCH1-215ENST00000547672 HYLS1Q96M11 299 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 FGF23Q9GZV9 251 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-215ENST00000547672 CLEC4MQ9H2X3 399 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms