RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 ZNF726A6NNF4 738 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 HIDE1A8MVS5 230 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 ZNF99A8MXY4 864 aaPredicted RBP3.88□□□□□ -1.79
NPAS3-204ENST00000546849 M0QX08 132 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 MANBAO00462 879 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 BCKDKO14874 412 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 LSM1O15116 133 aaKnown RBP3.88□□□□□ -1.79
NPAS3-204ENST00000546849 COCHO43405 550 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 SNAI2O43623 268 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 CD5LO43866 347 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 TPST1O60507 370 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 OR4Q2P0C623 313 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 RANBP1P43487 201 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 CRISP3P54108 245 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 NUTF2P61970 127 aaKnown RBP3.88□□□□□ -1.79
NPAS3-204ENST00000546849 C16orf72Q14CZ0 275 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 PTGES3Q15185 160 aaKnown RBP3.88□□□□□ -1.79
NPAS3-204ENST00000546849 NDUFA5Q16718 116 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 SPANXN2Q5MJ10 180 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 OR2T5Q6IEZ7 315 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 ANKRD26P1Q6NSI1 321 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 NIPAL1Q6NVV3 410 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 MED27Q6P2C8 311 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 SPESP1Q6UW49 350 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 FAM151BQ6UXP7 276 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 ZNF493Q6ZR52 646 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 LINC00173Q6ZV60 143 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 CPNE9Q8IYJ1 553 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 TRAM1L1Q8N609 369 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 OR8J2Q8NGG1 315 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 OR2T29Q8NH02 315 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 OR10A6Q8NH74 314 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 TMBIM1Q969X1 311 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 ISOC1Q96CN7 298 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 MRPL48Q96GC5 212 aaKnown RBP3.88□□□□□ -1.79
NPAS3-204ENST00000546849 DOK1Q99704 481 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 PATZ1Q9HBE1 687 aaKnown RBP3.88□□□□□ -1.79
NPAS3-204ENST00000546849 INPP5EQ9NRR6 644 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 CALML5Q9NZT1 146 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 ZNF629Q9UEG4 869 aaPredicted RBP3.88□□□□□ -1.79
NPAS3-204ENST00000546849 TBX21Q9UL17 535 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 HS3ST2Q9Y278 367 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 POFUT2Q9Y2G5 429 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 PPIL1Q9Y3C6 166 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 GOLT1BQ9Y3E0 138 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 POLR3HQ9Y535 204 aaPredicted RBP3.88□□□□□ -1.79
NPAS3-204ENST00000546849 WDR87Q6ZQQ6 2873 aa3.88□□□□□ -1.79
NPAS3-204ENST00000546849 ANKRD36A6QL64 1941 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 PTPRDP23468 1912 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ARRDC5A6NEK1 342 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CLDN24A6NM45 220 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 PDZK1P1A8MUH7 402 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 H0YIV9 168 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ANGPTL7O43827 346 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 NIPSNAP2O75323 286 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ZNF682O95780 498 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CLIC3O95833 236 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 SERPINA1P01009 418 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CD40LGP29965 261 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CDKN1BP46527 198 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 SLC11A1P49279 550 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ERFP50548 548 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 PFN3P60673 137 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 RPS24P62847 133 aaKnown RBP3.87□□□□□ -1.79
NPAS3-204ENST00000546849 SKP1P63208 163 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 GINS1Q14691 196 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 NEDD8Q15843 81 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CLLU1OSQ5K130 101 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CCNJQ5T5M9 372 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 HES5Q5TA89 166 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 GPR107Q5VW38 600 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ANGPTL8Q6UXH0 198 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ZFP2Q6ZN57 461 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ZNF836Q6ZNA1 936 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 EIF3MQ7L2H7 374 aaKnown RBP3.87□□□□□ -1.79
NPAS3-204ENST00000546849 FUNDC1Q8IVP5 155 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CYP4Z2PQ8N1L4 340 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 STX19Q8N4C7 294 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ZNF596Q8TC21 504 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 SLC7A13Q8TCU3 470 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ELMO1Q92556 727 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 AP3S1Q92572 193 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 RAD51AP1Q96B01 352 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 C12orf43Q96C57 262 aaKnown RBP3.87□□□□□ -1.79
NPAS3-204ENST00000546849 PPCDCQ96CD2 204 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 SLC7A5P2Q9GIP4 190 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 NDEL1Q9GZM8 345 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 GABARAPL1Q9H0R8 117 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 TPK1Q9H3S4 243 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ZDHHC4Q9NPG8 344 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CLN6Q9NWW5 311 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CMTM6Q9NX76 183 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ZMAT5Q9UDW3 170 aaKnown RBP3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CFL2Q9Y281 166 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 ERGIC3Q9Y282 383 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 SAMHD1Q9Y3Z3 626 aaKnown RBP3.87□□□□□ -1.79
NPAS3-204ENST00000546849 CSDC2Q9Y534 153 aaKnown RBP3.87□□□□□ -1.79
NPAS3-204ENST00000546849 TIMM22Q9Y584 194 aa3.87□□□□□ -1.79
NPAS3-204ENST00000546849 F11RQ9Y624 299 aaKnown RBP3.87□□□□□ -1.79
NPAS3-204ENST00000546849 COL4A4P53420 1690 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms