RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 DNLZQ5SXM8 178 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 HIST2H3PS2Q5TEC6 136 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 OR2T2Q6IF00 324 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 SLC35G3Q8N808 338 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 CCDC71LQ8N9Z2 235 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 OR11L1Q8NGX0 322 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 OR1L3Q8NH93 324 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 LMX1AQ8TE12 382 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 MEGF10Q96KG7 1140 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 MRGPRX4Q96LA9 322 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 METTL9Q9H1A3 318 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 WSB1Q9Y6I7 421 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 ARID1AO14497 2285 aa12.37□□□□□ -0.43
SRP54-202ENST00000546080 IGSF23A1L1A6 192 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 DRD1P21728 446 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 OMGP23515 440 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 CTSSP25774 331 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 CD81P60033 236 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 SLC22A25Q6T423 547 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 TCFL5Q9UL49 500 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 ATG2AQ2TAZ0 1938 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 ZNF724A8MTY0 619 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 LINC01565O15544 149 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 ANGPTL7O43827 346 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 IFNA10P01566 189 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 DBHP09172 617 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 FABP4P15090 132 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 DDTP30046 118 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 GUCA1AP43080 201 aaPredicted RBP12.36□□□□□ -0.43
SRP54-202ENST00000546080 MTCP1P56278 107 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 PLPPR5Q32ZL2 321 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 ZNF506Q5JVG8 444 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 CPEB2Q7Z5Q1 589 aaKnown RBP12.36□□□□□ -0.43
SRP54-202ENST00000546080 SLC35E3Q7Z769 313 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 D2HGDHQ8N465 521 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 CPNE4Q96A23 557 aaPredicted RBP12.36□□□□□ -0.43
SRP54-202ENST00000546080 OXGR1Q96P68 337 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 ANGPTL4Q9BY76 406 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 GPR173Q9NS66 373 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 SLC7A11Q9UPY5 501 aa12.36□□□□□ -0.43
SRP54-202ENST00000546080 ZNF814B7Z6K7 855 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 ONECUT2O95948 504 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 FOXL2P58012 376 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 HIST3H3Q16695 136 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 DTX1Q86Y01 620 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 RNASE11Q8TAA1 199 aaKnown RBP12.35□□□□□ -0.43
SRP54-202ENST00000546080 POC1BQ8TC44 478 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 DYRK2Q92630 601 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 SLC25A31Q9H0C2 315 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 PLEKHF2Q9H8W4 249 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 ZNF581Q9P0T4 197 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 PIAS3Q9Y6X2 628 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 A0A087X0M5 115 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 A0A1B0GX30 115 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 C10orf142B7Z368 130 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 ETV2O00321 342 aaPredicted RBP12.35□□□□□ -0.43
SRP54-202ENST00000546080 SPRY1O43609 319 aaPredicted RBP12.35□□□□□ -0.43
SRP54-202ENST00000546080 TLX3O43711 291 aaPredicted RBP12.35□□□□□ -0.43
SRP54-202ENST00000546080 CDS2O95674 445 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 TRGC1P0CF51 173 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 SELLP14151 372 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 NKX2-1P43699 371 aaPredicted RBP12.35□□□□□ -0.43
SRP54-202ENST00000546080 NOVA1P51513 510 aaKnown RBP12.35□□□□□ -0.43
SRP54-202ENST00000546080 HERV-K104P61576 105 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 AKR1C8PQ5T2L2 129 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 C1orf87Q8N0U7 546 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 SUMF1Q8NBK3 374 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 CCDC54Q8NEL0 328 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 GJC3Q8NFK1 279 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 M1APQ8TC57 530 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 TMEM171Q8WVE6 324 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 MOB3AQ96BX8 217 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 C10orf35Q96D05 121 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 RBMXL1Q96E39 390 aaKnown RBP12.35□□□□□ -0.43
SRP54-202ENST00000546080 TP53RKQ96S44 253 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 NKX2-4Q9H2Z4 354 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 PRO1933Q9H354 126 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 C11orf1Q9H5F2 150 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 ZNF286AQ9HBT8 521 aa12.35□□□□□ -0.43
SRP54-202ENST00000546080 FAM221AA4D161 298 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 NKX2-6A6NCS4 301 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 SLC31A2O15432 143 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 SSSCA1O60232 199 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 CD63P08962 238 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 FOLR1P15328 257 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 MSR1P21757 451 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 LSM6P62312 80 aaKnown RBP12.34□□□□□ -0.43
SRP54-202ENST00000546080 RPL23AP62750 156 aaKnown RBP12.34□□□□□ -0.43
SRP54-202ENST00000546080 VAMP2P63027 116 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 SLC25A53Q5H9E4 307 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 CDCP2Q5VXM1 449 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 STX12Q86Y82 276 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 C20orf196Q8IYI0 205 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 PLPP5Q8NEB5 264 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 FAM210BQ96KR6 192 aa12.34□□□□□ -0.43
SRP54-202ENST00000546080 FOXD3Q9UJU5 478 aaPredicted RBP12.34□□□□□ -0.43
SRP54-202ENST00000546080 A0A1B0GX78 115 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 B4DEV8 164 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 TRDCB7Z8K6 153 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 HBE1P02100 147 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms