RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 OR11H7Q8NGC8 314 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 CT55Q8WUE5 264 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 PRSS27Q9BQR3 290 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 MFRPQ9BY79 579 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 OR6C3Q9NZP0 311 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 LPAR3Q9UBY5 353 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 CRYM-AS1A6NIL9 109 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 CA11O75493 328 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 ZAR1Q86SH2 424 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 SPINT1O43278 529 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 DGAT2L6Q6ZPD8 337 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 GPA33Q99795 319 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 RAB33BQ9H082 229 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 CACNG5Q9UF02 275 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 YTHDF2Q9Y5A9 579 aaKnown RBP11.05□□□□□ -0.64
COL4A6-209ENST00000545689 TRIP11Q15643 1979 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 SPRY3O43610 288 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 FOXS1O43638 330 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 GREM1O60565 184 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 PNPP00491 289 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM33P57088 247 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 C1orf210Q8IVY1 113 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 CHST5Q9GZS9 411 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 PPP1R3EQ9H7J1 279 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 EML2O95834 649 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 ASAH2BP0C7U1 165 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 C9orf40Q8IXQ3 194 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 TMPRSS5Q9H3S3 457 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 HES4Q9HCC6 221 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 MCM3APO60318 1980 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 FAM24AA6NFZ4 105 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 RHOBP62745 196 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 SUMO1P63165 101 aaKnown RBP11.05□□□□□ -0.64
COL4A6-209ENST00000545689 ZBTB34Q8NCN2 500 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 SEC11CQ9BY50 192 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 OR2H1Q9GZK4 316 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 PILRAQ9UKJ1 303 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 FAM96BQ9Y3D0 163 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 A0A1W2PQF6 199 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 CLEC1BQ9P126 229 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 TCFL5Q9UL49 500 aa11.05□□□□□ -0.64
COL4A6-209ENST00000545689 OOEPA6NGQ2 149 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 CD82P27701 267 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 CD200P41217 278 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 GFRALQ6UXV0 394 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 hADV38S2A0JD32 116 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 B4DEV8 164 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 CDS2O95674 445 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-209ENST00000545689 TBC1D26Q86UD7 250 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 OR2D2Q9H210 308 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 AMMECR1Q9Y4X0 333 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-209ENST00000545689 SDHBP21912 280 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 KLF3P57682 345 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-209ENST00000545689 ERVFC1-1P60608 527 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 C1QL3Q5VWW1 255 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 C19orf35Q6ZS72 473 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 LRRC29Q8WV35 223 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 TRAPPC1Q9Y5R8 145 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 FCGR3BO75015 233 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 ZNF737O75373 536 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 DXOO77932 396 aaKnown RBP11.04□□□□□ -0.64
COL4A6-209ENST00000545689 HNF1AP20823 631 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 GALR1P47211 349 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 DMRTC1Q5HYR2 192 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 DPPA3Q6W0C5 159 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 HOGA1Q86XE5 327 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 NARFLQ9H6Q4 476 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 PSG11Q9UQ72 335 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 SOCS1O15524 211 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 LIFP15018 202 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 VDAC1P21796 283 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 C19orf57Q0VDD7 668 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 OR1L4Q8NGR5 311 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM230Q96A57 120 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 NRTNQ99748 197 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 WDR61Q9GZS3 305 aaKnown RBP11.04□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM38BQ9NVV0 291 aa11.04□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM210A6NLX4 147 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 H3BMH7 237 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 HRKO00198 91 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 CDC34P49427 236 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-209ENST00000545689 C9orf152Q5JTZ5 239 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 ZNF835Q9Y2P0 537 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 TRAV8-7A0A075B6U6 113 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 TRBV5-5A0A0J9YX44 114 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 SMRP1Q8NCR6 262 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM104Q8NE00 496 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 IFT22Q9H7X7 185 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 GPR35Q9HC97 309 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 RBFOX3A6NFN3 312 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 CXCL3P19876 107 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 Q3ZCU0 254 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 CD200R1LQ6Q8B3 271 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 OR4S2Q8NH73 311 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM218A2RU14 115 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 NTN1O95631 604 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 VSIG8P0DPA2 414 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 HLA-DRB3P79483 266 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 C16orf47Q6ZP98 133 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms