RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 FAM71F2Q6NXP2 309 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 UGT2A3Q6UWM9 527 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 MBOAT1Q6ZNC8 495 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 RBM43Q6ZSC3 357 aaKnown RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 H2AFVQ71UI9 128 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 LINC00523Q86TU6 105 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 PLCZ1Q86YW0 608 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 KATNAL2Q8IYT4 538 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 ST13P4Q8IZP2 240 aaPredicted RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 OR2L13Q8N349 312 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 CD200R1Q8TD46 325 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 SKA2Q8WVK7 121 aaPredicted RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 ANKRD7Q92527 254 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 PPWD1Q96BP3 646 aaKnown RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 WDR34Q96EX3 536 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 SNF8Q96H20 258 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 KIFC1Q9BW19 673 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 ZNF717Q9BY31 904 aaPredicted RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 MRPL13Q9BYD1 178 aaKnown RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 POTEKPQ9BYX7 375 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 CXorf21Q9HAI6 301 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 PARVBQ9HBI1 364 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 GLRX2Q9NS18 164 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 LYARQ9NX58 379 aaKnown RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 ZNF639Q9UID6 485 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 MRPS33Q9Y291 106 aaKnown RBP2.04□□□□□ -2.08
SNHG1-224ENST00000545688 ZNF337Q9Y3M9 751 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 WNK2Q9Y3S1 2297 aa2.04□□□□□ -2.08
SNHG1-224ENST00000545688 PRSS37A4D1T9 235 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 OR6C70A6NIJ9 312 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 C17orf51A8MQB3 221 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 H7C0C1 242 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ACOX3O15254 700 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ERI3O43414 337 aaKnown RBP2.03□□□□□ -2.08
SNHG1-224ENST00000545688 FADS1O60427 444 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 UGT2B11O75310 529 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ZNF189O75820 626 aaPredicted RBP2.03□□□□□ -2.08
SNHG1-224ENST00000545688 VAMP5O95183 116 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 C8GP07360 202 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 CT62P0C5K7 136 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 SLC35E2BP0CK96 405 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 TNNI3P19429 210 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 OGNP20774 298 aaKnown RBP2.03□□□□□ -2.08
SNHG1-224ENST00000545688 DRD5P21918 477 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 AGTR1P30556 359 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ATP5OP48047 213 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 MARCKSL1P49006 195 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 TMED10P49755 219 aaKnown RBP2.03□□□□□ -2.08
SNHG1-224ENST00000545688 FABP6P51161 128 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 AP1S2P56377 157 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 DSCR4P56555 118 aaPredicted RBP2.03□□□□□ -2.08
SNHG1-224ENST00000545688 STX4Q12846 297 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 MICBQ29980 383 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 TTLL9Q3SXZ7 439 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 TP53I3Q53FA7 332 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 TIMM23BQ5SRD1 257 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ANKRD22Q5VYY1 191 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ADNP2Q6IQ32 1131 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 Q6ZT83 130 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 CPNE9Q8IYJ1 553 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ZCCHC7Q8N3Z6 543 aaKnown RBP2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ACOT4Q8N9L9 421 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 TTLQ8NG68 377 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 OR1N2Q8NGR9 330 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 OR2G3Q8NGZ4 309 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ZNF75CPQ92670 426 aaPredicted RBP2.03□□□□□ -2.08
SNHG1-224ENST00000545688 HAUS1Q96CS2 278 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 NAP1L5Q96NT1 182 aaPredicted RBP2.03□□□□□ -2.08
SNHG1-224ENST00000545688 AIF1LQ9BQI0 150 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 NIPSNAP3BQ9BS92 247 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 SUCNR1Q9BXA5 334 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 MS4A8Q9BY19 250 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 CHRAC1Q9NRG0 131 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ZNF355PQ9NSJ1 428 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 ZNF229Q9UJW7 825 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 RASD1Q9Y272 281 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 HYOU1Q9Y4L1 999 aa2.03□□□□□ -2.08
SNHG1-224ENST00000545688 KMT2AQ03164 3969 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 A0A0J9YW62 118 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 C5orf63A6NC05 138 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 OR5H1A6NKK0 313 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 NPIPA7E9PJI5 369 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 J3QLI3 93 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 SCAMP2O15127 329 aaKnown RBP2.02□□□□□ -2.09
SNHG1-224ENST00000545688 EEDO75530 441 aaKnown RBP2.02□□□□□ -2.09
SNHG1-224ENST00000545688 CLPXO76031 633 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 VAPBO95292 243 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 GPR75O95800 540 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 OPN1MWP04001 364 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 SERPIND1P05546 499 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 TPM2P07951 284 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 MSMBP08118 114 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 NPIPA8P0DM63 369 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 C1GALT1C1LP0DN25 315 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 OPN1MW2P0DN77 364 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 OPN1MW3P0DN78 364 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 NT5EP21589 574 aa2.02□□□□□ -2.09
SNHG1-224ENST00000545688 HIST1H1TP22492 207 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms