RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 YIPF5Q969M3 257 aa11.64□□□□□ -0.55
SCARB1-209ENST00000545305 PECRQ9BY49 303 aa11.64□□□□□ -0.55
SCARB1-209ENST00000545305 ZMAT3Q9HA38 289 aaKnown RBP11.64□□□□□ -0.55
SCARB1-209ENST00000545305 UBTD1Q9HAC8 227 aa11.64□□□□□ -0.55
SCARB1-209ENST00000545305 HES4Q9HCC6 221 aa11.64□□□□□ -0.55
SCARB1-209ENST00000545305 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCARB1-209ENST00000545305 RASL12Q9NYN1 266 aa11.64□□□□□ -0.55
SCARB1-209ENST00000545305 RNF7Q9UBF6 113 aa11.64□□□□□ -0.55
SCARB1-209ENST00000545305 HSF4Q9ULV5 492 aa11.64□□□□□ -0.55
SCARB1-209ENST00000545305 PPP1R3CQ9UQK1 317 aa11.64□□□□□ -0.55
SCARB1-209ENST00000545305 MYO18BQ8IUG5 2567 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 LRRC30A6NM36 301 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 RBBP9O75884 186 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 MELTFP08582 738 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 GSTT2BP0CG30 244 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 COX6B1P14854 86 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 FUT3P21217 361 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 CHATP28329 748 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 GDNFP39905 211 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 TMEM50BP56557 158 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 ACTBP60709 375 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 ACTG1P63261 375 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 SSBP1Q04837 148 aaKnown RBP11.63□□□□□ -0.55
SCARB1-209ENST00000545305 PLAC9Q5JTB6 97 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 ACP7Q6ZNF0 438 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 TRAPPC6BQ86SZ2 158 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 FAM90A1Q86YD7 464 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 TOMM5Q8N4H5 51 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 BOLLQ8N9W6 283 aaKnown RBP11.63□□□□□ -0.55
SCARB1-209ENST00000545305 SETD6Q8TBK2 473 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 TRIM63Q969Q1 353 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 VRK1Q99986 396 aaPredicted RBP11.63□□□□□ -0.55
SCARB1-209ENST00000545305 GCM1Q9NP62 436 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 IFT46Q9NQC8 304 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 IL36RNQ9UBH0 155 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 DNAJB11Q9UBS4 358 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 NPTNQ9Y639 398 aa11.63□□□□□ -0.55
SCARB1-209ENST00000545305 LINC00854A0A1B0GVQ3 168 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 MEIOCA2RUB1 952 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 SRRM5B3KS81 715 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 H7C417 338 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 IFNL4K9M1U5 179 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 SH2D1BO14796 132 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 WNT9BO14905 357 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 CA11O75493 328 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 ECDO95905 644 aaPredicted RBP11.62□□□□□ -0.55
SCARB1-209ENST00000545305 KNG1P01042 644 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 ZNF44P15621 663 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 DUSP1P28562 367 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 CBX5P45973 191 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 IFITM3Q01628 133 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 GUCA2AQ02747 115 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 RGS21Q2M5E4 152 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 SPRNQ5BIV9 151 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 SIGIRRQ6IA17 410 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 C6orf201Q7Z4U5 140 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 DTX2Q86UW9 622 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 C1orf87Q8N0U7 546 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 ZCCHC24Q8N2G6 241 aaKnown RBP11.62□□□□□ -0.55
SCARB1-209ENST00000545305 POC5Q8NA72 575 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 NEK7Q8TDX7 302 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 GPX8Q8TED1 209 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 NUDCD2Q8WVJ2 157 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 ST8SIA4Q92187 359 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 SEH1LQ96EE3 360 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 COX4I2Q96KJ9 171 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 RAB1BQ9H0U4 201 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 TAS2R8Q9NYW2 309 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 MTFP1Q9UDX5 166 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 OR14J1Q9UGF5 321 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 PLEKHA6Q9Y2H5 1048 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 ADGRG4Q8IZF6 3080 aa11.62□□□□□ -0.55
SCARB1-209ENST00000545305 A1L4Q6 167 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 CLEC18AA5D8T8 446 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 MCRIP1C9JLW8 97 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 DEGS1O15121 323 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 HAND1O96004 215 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 CSF1P09603 554 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 RCVRNP35243 200 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 PMELP40967 661 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 TLE4Q04727 773 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 ASAH1Q13510 395 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 ZNF146Q15072 292 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 PDCD1Q15116 288 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 CLEC18BQ6UXF7 455 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 DNM1P46Q6ZS02 220 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 RTN4RL2Q86UN3 420 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 GCSAMQ8N6F7 178 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 CLEC18CQ8NCF0 446 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 TRAF4Q9BUZ4 470 aaPredicted RBP11.61□□□□□ -0.55
SCARB1-209ENST00000545305 WDR13Q9H1Z4 485 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 IFT22Q9H7X7 185 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 RCC2Q9P258 522 aaKnown RBP11.61□□□□□ -0.55
SCARB1-209ENST00000545305 KLK11Q9UBX7 282 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 RBMX2Q9Y388 322 aaKnown RBP11.61□□□□□ -0.55
SCARB1-209ENST00000545305 RELNP78509 3460 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 CHD6Q8TD26 2715 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 ICE1Q9Y2F5 2266 aa11.61□□□□□ -0.55
SCARB1-209ENST00000545305 UBR5O95071 2799 aaPredicted RBP11.61□□□□□ -0.55
SCARB1-209ENST00000545305 ROS1P08922 2347 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms