RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 NECAP2Q9NVZ3 263 aa11.78□□□□□ -0.52
SLC3A2-220ENST00000542922 SPRR3Q9UBC9 169 aa11.78□□□□□ -0.52
SLC3A2-220ENST00000542922 EDARQ9UNE0 448 aa11.78□□□□□ -0.52
SLC3A2-220ENST00000542922 SESN1Q9Y6P5 492 aa11.78□□□□□ -0.52
SLC3A2-220ENST00000542922 SPENQ96T58 3664 aaKnown RBP11.77□□□□□ -0.52
SLC3A2-220ENST00000542922 HOXD4P09016 255 aaPredicted RBP11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 LYL1P12980 280 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 RBMXP38159 391 aaKnown RBP11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 RAB1AP62820 205 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 PMP22Q01453 160 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 OR11L1Q8NGX0 322 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 C17orf50Q8WW18 174 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 FAM117AQ9C073 453 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 ZNF552Q9H707 407 aaPredicted RBP11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 TMEM9BQ9NQ34 198 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 ZFHX4Q86UP3 3567 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 EP300Q09472 2414 aaPredicted RBP11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 FCGR2CP31995 323 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 HAAOP46952 286 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 NOVA1P51513 510 aaKnown RBP11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 IAH1Q2TAA2 248 aaPredicted RBP11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 PAN3Q58A45 887 aaKnown RBP11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 MRPL21Q7Z2W9 205 aaKnown RBP11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 OR1S2Q8NGQ3 325 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 TMED6Q8WW62 240 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 POM121L2Q96KW2 1035 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 ZNF442Q9H7R0 627 aa11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 KLF13Q9Y2Y9 288 aaPredicted RBP11.77□□□□□ -0.53
SLC3A2-220ENST00000542922 ZNF724A8MTY0 619 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 B8ZZF3 427 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 HSPB6O14558 160 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 IL18BPO95998 194 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 OR5AC1P0C628 307 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 ZNF728P0DKX0 622 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 MALLQ13021 153 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 IGSF11Q5DX21 431 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 GGNBP1Q5YKI7 109 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 DHRS11Q6UWP2 260 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 SGPP2Q8IWX5 399 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 STOML3Q8TAV4 291 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 PHYHIPLQ96FC7 376 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 ASF1BQ9NVP2 202 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 ATPIF1Q9UII2 106 aa11.76□□□□□ -0.53
SLC3A2-220ENST00000542922 SS18L1O75177 396 aaPredicted RBP11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 WISP2O76076 250 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 ZNF806P0C7X5 589 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 DUSP1P28562 367 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 WNT5AP41221 380 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 ARHGDIBP52566 201 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 OR2A2Q6IF42 318 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 ATRAIDQ6UW56 229 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 EIF4E3Q8N5X7 224 aaKnown RBP11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 ZFP62Q8NB50 900 aaPredicted RBP11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 OR5L1Q8NGL2 311 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 ZNF488Q96MN9 340 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 SHARPINQ9H0F6 387 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 C12orf4Q9NQ89 552 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 OR2S2Q9NQN1 319 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 C1orf123Q9NWV4 160 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 PCDHB10Q9UN67 800 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 SPEF1Q9Y4P9 236 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 ZNF732B4DXR9 585 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 SYNGR1O43759 233 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 RCC1P18754 421 aaPredicted RBP11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 FUT3P21217 361 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 AADACP22760 399 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 BTN1A1Q13410 526 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 SLC10A1Q14973 349 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 ZNF585AQ6P3V2 769 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 MYPOPQ86VE0 399 aaPredicted RBP11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 MCEMP1Q8IX19 187 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 EXTL1Q92935 676 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 APOBEC3DQ96AK3 386 aaPredicted RBP11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 FER1L6-AS2Q96M78 137 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 AQP10Q96PS8 301 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 SLC5A7Q9GZV3 580 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 ZNF286AQ9HBT8 521 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 TAS2R3Q9NYW6 316 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 MTCH1Q9NZJ7 389 aa11.75□□□□□ -0.53
SLC3A2-220ENST00000542922 CFAP47Q6ZTR5 3102 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 OTOGLQ3ZCN5 2332 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 KRBOX1C9JBD0 128 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 KLRC4-KLRK1H3BQV0 150 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 M6PRP20645 277 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 SPATA46Q5T0L3 261 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 BAP18Q8IXM2 172 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 ZDHHC23Q8IYP9 409 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 SLC30A7Q8NEW0 376 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 BPIFCQ8NFQ6 507 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 RTN4IP1Q8WWV3 396 aaPredicted RBP11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 WDYHV1Q96HA8 205 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 TECTBQ96PL2 329 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 LDAHQ9H6V9 325 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 NAA60Q9H7X0 242 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 SLC2A9Q9NRM0 540 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 A0A1W2PR80 420 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 SCGB1D2O95969 90 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 HKR1P10072 659 aa11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 TPT1P13693 172 aaKnown RBP11.74□□□□□ -0.53
SLC3A2-220ENST00000542922 ECI1P42126 302 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms