RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 ZBTB9Q96C00 473 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TPD52L3Q96J77 140 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 ERMAPQ96PL5 475 aaPredicted RBP3.69□□□□□ -1.82
LIMS1-214ENST00000542845 OR4C12Q96R67 309 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 OR52B2Q96RD2 323 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 NMNAT3Q96T66 252 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 NABP2Q9BQ15 211 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 CHCHD6Q9BRQ6 235 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 FNDC11Q9BVV2 318 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 NDEL1Q9GZM8 345 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TLNRD1Q9H1K6 362 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 TMEM133Q9H2Q1 129 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 HIPK2Q9H2X6 1198 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 CCDC134Q9H6E4 229 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 OPA3Q9H6K4 179 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 CCDC167Q9P0B6 97 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 CYB5R1Q9UHQ9 305 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 BAG5Q9UL15 447 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 HHLA2Q9UM44 414 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 SESN1Q9Y6P5 492 aa3.69□□□□□ -1.82
LIMS1-214ENST00000542845 DNAH10Q8IVF4 4471 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 MAGEA13PA6NCF6 341 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 MTRF1O75570 445 aaKnown RBP3.68□□□□□ -1.82
LIMS1-214ENST00000542845 MMP23AO75900 390 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 NXPH2O95156 264 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 NDUFB2O95178 105 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 IGHG2P01859 326 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 GCSHP23434 173 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 HSD11B1P28845 292 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 PYCR1P32322 319 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 RPS19P39019 145 aaKnown RBP3.68□□□□□ -1.82
LIMS1-214ENST00000542845 CEACAM3P40198 252 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 CX3CR1P49238 355 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 RPS6KA3P51812 740 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 GNB1P62873 340 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 VAMP2P63027 116 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 NHLH2Q02577 135 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 IFFO1Q0D2I5 559 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 FOXE3Q13461 319 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 SMIM21Q3B7S5 101 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 ANKDD1AQ495B1 522 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 PRAMEF5Q5TYX0 476 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 HAGHLQ6PII5 290 aaPredicted RBP3.68□□□□□ -1.82
LIMS1-214ENST00000542845 ZBTB49Q6ZSB9 765 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 MOB3CQ70IA8 216 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 ADCK1Q86TW2 530 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 ANKRD13BQ86YJ7 626 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 FTMTQ8N4E7 242 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 C5orf56Q8N8D9 126 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 CSNK2A3Q8NEV1 391 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 OR4C15Q8NGM1 316 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 OR4K13Q8NH42 304 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 OR10A6Q8NH74 314 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 OR56B4Q8NH76 319 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 ARPC1AQ92747 370 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 SLAMF6Q96DU3 332 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 SPDL1Q96EA4 605 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 PGAM5Q96HS1 289 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 OR8B4Q96RC9 309 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 GON7Q9BXV9 100 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 PARD6BQ9BYG5 372 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 TXLNGYQ9BZA5 131 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 FGF23Q9GZV9 251 aaPredicted RBP3.68□□□□□ -1.82
LIMS1-214ENST00000542845 ALX4Q9H161 411 aaPredicted RBP3.68□□□□□ -1.82
LIMS1-214ENST00000542845 GNB4Q9HAV0 340 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 NRIP3Q9NQ35 241 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 SDR39U1Q9NRG7 319 aaPredicted RBP3.68□□□□□ -1.82
LIMS1-214ENST00000542845 RASL12Q9NYN1 266 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 ACTR3BQ9P1U1 418 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 MPC1Q9Y5U8 109 aa3.68□□□□□ -1.82
LIMS1-214ENST00000542845 DSCAML1Q8TD84 2053 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 A0A087WUU8 490 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 hCG_38984A0A1B0GV85 526 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 hADV38S2A0JD32 116 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 HTR3EA5X5Y0 456 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 OR6C68A6NDL8 312 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 NUPR2A6NF83 97 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 FAM183AA6NL82 134 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 A8MZ25 164 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 BUB1B-PAK6H3BSN5 160 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 BIRC5O15392 142 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 TRIAP1O43715 76 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 IGHV3-7P01780 117 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 RBP4P02753 201 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 ELANEP08246 267 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 HIST1H1CP16403 213 aaKnown RBP3.67□□□□□ -1.82
LIMS1-214ENST00000542845 VDAC1P21796 283 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 DCTDP32321 178 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 PRRX1P54821 245 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 PITPNAQ00169 270 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 TRAM2Q15035 370 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 CD300EQ496F6 205 aaPredicted RBP3.67□□□□□ -1.82
LIMS1-214ENST00000542845 LRRC23Q53EV4 343 aaPredicted RBP3.67□□□□□ -1.82
LIMS1-214ENST00000542845 KLHL12Q53G59 568 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 AGKQ53H12 422 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 TPTE2P1Q5T6R2 138 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 ASPHD1Q5U4P2 390 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 ACSM6Q6P461 480 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 CEMP1Q6PRD7 247 aaPredicted RBP3.67□□□□□ -1.82
LIMS1-214ENST00000542845 SMARCD3Q6STE5 483 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms