RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 TMEM14AQ9Y6G1 99 aa12.33□□□□□ -0.44
CLSTN3-213ENST00000541953 MINOS1-NBL1R4GNA1 71 aa12.33□□□□□ -0.44
CLSTN3-213ENST00000541953 SACSQ9NZJ4 4579 aa12.33□□□□□ -0.44
CLSTN3-213ENST00000541953 TCRBV4S1A1TA0A5B7 111 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 AQP12BA6NM10 295 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 FKBP6O75344 327 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 BCL3P20749 454 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 OR3A1P47881 315 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 MNAT1P51948 309 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 CBX1P83916 185 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 MEF2CQ06413 473 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 GRK1Q15835 563 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 FAHD1Q6P587 224 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 CATSPERDQ86XM0 798 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 AQP12AQ8IXF9 295 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 PRSS35Q8N3Z0 413 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 TCEANCQ8N8B7 351 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 DTX3Q8N9I9 347 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 EMG1Q92979 244 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 ITFG2Q969R8 447 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 SNX22Q96L94 193 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 THTPAQ9BU02 230 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 PAPOLBQ9NRJ5 636 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 SNX5Q9Y5X3 404 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 LINC00312Q9Y6C7 94 aa12.32□□□□□ -0.44
CLSTN3-213ENST00000541953 IGKV1-9A0A0C4DH69 117 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 hADV38S2A0JD32 116 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 DHRS7CA6NNS2 312 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 PF4P02776 101 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 CALB2P22676 271 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 GABRR1P24046 479 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 EGFL6Q8IUX8 553 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 LINC00482Q8N8I6 264 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 IL4I1Q96RQ9 567 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 SLC25A33Q9BSK2 321 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 CHST5Q9GZS9 411 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 ZNF286AQ9HBT8 521 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 CLN6Q9NWW5 311 aa12.31□□□□□ -0.44
CLSTN3-213ENST00000541953 SIRPB1O00241 398 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 ENTPD6O75354 484 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 IGLV1-47P01700 117 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 AZGP1P25311 298 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 HTR1DP28221 377 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 KIR3DL2P43630 455 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 SLC35A2P78381 396 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 EGFEM1PQ0D2K5 195 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 KHDC1LQ5JSQ8 128 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 CENPVQ7Z7K6 275 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 SPATA24Q86W54 205 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 RDH10Q8IZV5 341 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 TSSC4Q9Y5U2 329 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 RYR2Q92736 4967 aa12.3□□□□□ -0.44
CLSTN3-213ENST00000541953 IGKV1-12A0A0C4DH73 117 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 A0A1W2PQL4 384 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 TCRBV3S1A0A5B6 114 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 ZNF670-ZNF695F2Z2N8 137 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 SYT7O43581 403 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 DNAJC8O75937 253 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 IGKV1D-12P01611 117 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 ALDOBP05062 364 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 CDK2P24941 298 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 POU3F4P49335 361 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 P2RX3P56373 397 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 DEFB121Q5J5C9 76 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 SLX4IPQ5VYV7 408 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 NXNL2Q5VZ03 156 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 C12orf73Q69YU5 71 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 ABHD12Q8N2K0 398 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 YIPF7Q8N8F6 280 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 TMEM163Q8TC26 289 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 UTP4Q969X6 686 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 RFT1Q96AA3 541 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 ADAT3Q96EY9 351 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 LIN7BQ9HAP6 207 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 PLEKHA1Q9HB21 404 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 HHLA2Q9UM44 414 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 SLC7A11Q9UPY5 501 aa12.29□□□□□ -0.44
CLSTN3-213ENST00000541953 LOC107986453A0A1B0GWG9 222 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 ZAR1LA6NP61 321 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 CCDC159P0C7I6 412 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 PRKACAP17612 351 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 PEX2P28328 305 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 GLIPR1P48060 266 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 FUT6P51993 359 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 BDH1Q02338 343 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 TRAPPC6BQ86SZ2 158 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 BORCS8Q96FH0 119 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 COQ2Q96H96 371 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 RCC1LQ96I51 464 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 RBM14Q96PK6 669 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 DPM3Q9P2X0 92 aa12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.28□□□□□ -0.44
CLSTN3-213ENST00000541953 TRBV2A0A0J9YWF9 115 aa12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 OR2F2O95006 317 aa12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 POLR2IP36954 125 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 AESQ08117 197 aa12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 FLOT2Q14254 428 aa12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 ZNF146Q15072 292 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms