RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PCDHGB5Q9Y5G0 923 aa13.87□□□□□ -0.19
CD9-209ENST00000540891 IGHV1-69DA0A0B4J2H0 117 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 PNMA8CA0A1B0GUJ8 204 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 A0A1W2PQ09 198 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 RNASEK-C17orf49H0YIS7 233 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 HAND1O96004 215 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 CYB5AP00167 134 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 IGHV1-69P01742 117 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 PRKACAP17612 351 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 DUSP1P28562 367 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 TAS2R43P59537 309 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 BPIFB3P59826 476 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 UBA52P62987 128 aaKnown RBP13.86□□□□□ -0.19
CD9-209ENST00000540891 SLC35A2P78381 396 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 DEFB112Q30KQ8 113 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 YIF1BQ5BJH7 314 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 TMEM200BQ69YZ2 307 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 METAP1DQ6UB28 335 aaPredicted RBP13.86□□□□□ -0.19
CD9-209ENST00000540891 C17orf107Q6ZR85 190 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 PDZD9Q8IXQ8 264 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 SAXO1Q8IYX7 474 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 CMTM4Q8IZR5 234 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 FAM185AQ8N0U4 392 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 OR4M1Q8NGD0 313 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 OR52N4Q8NGI2 321 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 NKX3-1Q99801 234 aaPredicted RBP13.86□□□□□ -0.19
CD9-209ENST00000540891 CDCA4Q9BXL8 241 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 PRDM13Q9H4Q3 707 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 NEK6Q9HC98 313 aa13.86□□□□□ -0.19
CD9-209ENST00000540891 LSM2Q9Y333 95 aaKnown RBP13.86□□□□□ -0.19
CD9-209ENST00000540891 DNAJC9-AS1A6NH13 148 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 TRIM77I1YAP6 450 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 M0R1W7 72 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 GABRPO00591 440 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 CD2P06729 351 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 IGFBP3P17936 291 aaPredicted RBP13.85□□□□□ -0.19
CD9-209ENST00000540891 SNU13P55769 128 aaKnown RBP13.85□□□□□ -0.19
CD9-209ENST00000540891 RPL31P62899 125 aaKnown RBP13.85□□□□□ -0.19
CD9-209ENST00000540891 ZNF273Q14593 569 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 IRF3Q14653 427 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 Q499Y3 187 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 C1orf122Q6ZSJ8 110 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 C11orf42Q8N5U0 333 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 ASCC1Q8N9N2 400 aaKnown RBP13.85□□□□□ -0.19
CD9-209ENST00000540891 ZSCAN4Q8NAM6 433 aaPredicted RBP13.85□□□□□ -0.19
CD9-209ENST00000540891 FAM216AQ8WUB2 273 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 DUX5Q96PT3 197 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 OR5M11Q96RB7 305 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 DUSP21Q9H596 190 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 UNKLQ9H9P5 680 aaKnown RBP13.85□□□□□ -0.19
CD9-209ENST00000540891 SCN3BQ9NY72 215 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 ERGIC3Q9Y282 383 aa13.85□□□□□ -0.19
CD9-209ENST00000540891 TRBV5-7A0A0A0MS05 114 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 PSPNO60542 156 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 ALDOBP05062 364 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 CD1AP06126 327 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 TMEM225BP0DP42 221 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 CELP19835 753 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 HSPA13P48723 471 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 ACSM1Q08AH1 577 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 KLRD1Q13241 179 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 SPIN3Q5JUX0 258 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 HCP5Q6MZN7 132 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 RBMS3Q6XE24 437 aaKnown RBP13.84□□□□□ -0.19
CD9-209ENST00000540891 TCF23Q7RTU1 214 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 OR8H2Q8N162 312 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 MYDGFQ969H8 173 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 SNX22Q96L94 193 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 OR14A2Q96R54 314 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 GSTK1Q9Y2Q3 226 aa13.84□□□□□ -0.19
CD9-209ENST00000540891 TRAV8-7A0A075B6U6 113 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 MAGEA13PA6NCF6 341 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 PIN1P1O15428 100 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 GPX5O75715 221 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 CCL3L1P16619 93 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 PRTN3P24158 256 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 ERVFRD-1P60508 538 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 BDH1Q02338 343 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 BAMBIQ13145 260 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 SLC9A3R2Q15599 337 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 FIP1L1Q6UN15 594 aaKnown RBP13.83□□□□□ -0.2
CD9-209ENST00000540891 PXT1Q8NFP0 134 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 OR4S1Q8NGB4 309 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 MND1Q9BWT6 205 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 CHST6Q9GZX3 395 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 METTL8Q9H825 291 aaKnown RBP13.83□□□□□ -0.2
CD9-209ENST00000540891 RHOFQ9HBH0 211 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 TMEM138Q9NPI0 162 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 TPRKBQ9Y3C4 175 aa13.83□□□□□ -0.2
CD9-209ENST00000540891 A0A0U1RQK1 487 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 A0A1W2PPK0 400 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 OR2H2O95918 312 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 FSTP19883 344 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 CRHBPP24387 322 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 LMO1P25800 156 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 BDKRB2P30411 391 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 OR3A1P47881 315 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 OR3A4PP47883 348 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 DLX6P56179 175 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms