RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 HOGA1Q86XE5 327 aa10.63□□□□□ -0.71
SMAD3-204ENST00000540846 FBXL14Q8N1E6 418 aa10.63□□□□□ -0.71
SMAD3-204ENST00000540846 BHLHE23Q8NDY6 225 aa10.63□□□□□ -0.71
SMAD3-204ENST00000540846 OR13C8Q8NGS7 320 aa10.63□□□□□ -0.71
SMAD3-204ENST00000540846 EMG1Q92979 244 aaKnown RBP10.63□□□□□ -0.71
SMAD3-204ENST00000540846 DACT3Q96B18 629 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-204ENST00000540846 HIST1H2AAQ96QV6 131 aa10.63□□□□□ -0.71
SMAD3-204ENST00000540846 SEC22CQ9BRL7 303 aa10.63□□□□□ -0.71
SMAD3-204ENST00000540846 OR2J1Q9GZK6 312 aa10.63□□□□□ -0.71
SMAD3-204ENST00000540846 GPN1Q9HCN4 374 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-204ENST00000540846 MYOZ1Q9NP98 299 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-204ENST00000540846 NDRG3Q9UGV2 375 aa10.63□□□□□ -0.71
SMAD3-204ENST00000540846 POU2F3Q9UKI9 436 aa10.63□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A10PA6NDY2 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A18PA6NE21 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A16PA6NEW6 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A20PA6NIJ5 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A8PA6NJQ4 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A7PA6NKC0 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A22PA8MWA6 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A12PA8MX19 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A5PA8MXJ8 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A23PA8MXZ1 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 ATP6V1G2-DDX39BF2Z307 99 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 SSNA1O43805 119 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 CREBL2O60519 120 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-204ENST00000540846 RLN1P04808 185 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A15PP0C7V4 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A13PP0C7W8 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A14PP0C7W9 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 FAM90A24PP0C7X0 464 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 TUBG1P23258 451 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 PTAFRP25105 342 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 HAAOP46952 286 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 UCP2P55851 309 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 ERVS71-1P61550 626 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 GNG3P63215 75 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 DAZAP2Q15038 168 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-204ENST00000540846 NKPD1Q17RQ9 610 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 MSMPQ1L6U9 139 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 MICBQ29980 383 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 NHLRC3Q5JS37 347 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 NCMAPQ5T1S8 102 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 TMEM108Q6UXF1 575 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 DMRTC2Q8IXT2 367 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-204ENST00000540846 OR4K15Q8NH41 348 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 ALX4Q9H161 411 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-204ENST00000540846 TUBG2Q9NRH3 451 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 NOP16Q9Y3C1 178 aaKnown RBP10.62□□□□□ -0.71
SMAD3-204ENST00000540846 KLF2Q9Y5W3 355 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-204ENST00000540846 ROS1P08922 2347 aa10.62□□□□□ -0.71
SMAD3-204ENST00000540846 MEIKINA0A087WXM9 373 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-204ENST00000540846 TMEM82A0PJX8 343 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 IQCF6A8MYZ5 107 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 GEMIN2O14893 280 aaKnown RBP10.61□□□□□ -0.71
SMAD3-204ENST00000540846 CRYAAP02489 173 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 C1QBP02746 253 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 ANXA3P12429 323 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 SELEP16581 610 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 AMY2BP19961 511 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 PMELP40967 661 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 NPBWR2P48146 333 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 KCNJ8Q15842 424 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 NKAPLQ5M9Q1 402 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 UNQ6126/PRO20091Q6UXV3 157 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 ZNF573Q86YE8 665 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 MKXQ8IYA7 352 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 ARRDC1Q8N5I2 433 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 OR10AD1Q8NGE0 317 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 OR1J1Q8NGS3 322 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 SLC25A40Q8TBP6 338 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 MRGPRFQ96AM1 343 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 PKIBQ9C010 78 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 PLEKHJ1Q9NW61 149 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 ZNF581Q9P0T4 197 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 ST3GAL6Q9Y274 331 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 NPTNQ9Y639 398 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 ABCA4P78363 2273 aa10.61□□□□□ -0.71
SMAD3-204ENST00000540846 RAI1Q7Z5J4 1906 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-204ENST00000540846 SHISA9B4DS77 424 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 PRSS44E7EML9 344 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 ABCD4O14678 606 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 PDCD6O75340 191 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 CSN2P05814 226 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 CXCL3P19876 107 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 BCL3P20749 454 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 CA6P23280 308 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 DTYMKP23919 212 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 TAS2R46P59540 309 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 FGF12P61328 243 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 SCGB2B2Q4G0G5 96 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 ATPAF1Q5TC12 328 aaPredicted RBP10.6□□□□□ -0.71
SMAD3-204ENST00000540846 NOXA1Q86UR1 476 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 C1orf174Q8IYL3 243 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 SPICQ8N5J4 248 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 ZDHHC22Q8N966 263 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 CCDC107Q8WV48 283 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 SLAMF9Q96A28 289 aa10.6□□□□□ -0.71
SMAD3-204ENST00000540846 PLPPR2Q96GM1 343 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms