RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ADAM5Q6NVV9 412 aa20.81■□□□□ 0.92
TTC3-225ENST00000540756 BPIFB2Q8N4F0 458 aa20.81■□□□□ 0.92
TTC3-225ENST00000540756 OR4K15Q8NH41 348 aa20.81■□□□□ 0.92
TTC3-225ENST00000540756 LILRB4Q8NHJ6 448 aa20.81■□□□□ 0.92
TTC3-225ENST00000540756 GINS4Q9BRT9 223 aa20.81■□□□□ 0.92
TTC3-225ENST00000540756 CXXC4Q9H2H0 198 aa20.81■□□□□ 0.92
TTC3-225ENST00000540756 CA10Q9NS85 328 aa20.81■□□□□ 0.92
TTC3-225ENST00000540756 SPTBN1Q01082 2364 aaKnown RBP20.81■□□□□ 0.92
TTC3-225ENST00000540756 NAT1P18440 290 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 FUT3P21217 361 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 Q6ZPA2 131 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 ZNF554Q86TJ5 538 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 ZFYVE26Q68DK2 2539 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 CACNA1DQ01668 2161 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 PKDREJQ9NTG1 2253 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 IGLV3-9A0A075B6K5 115 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 A0A1B0GWJ7 208 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 PYCARD-AS1I3L0S3 204 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 ERVK11-1P61568 191 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 IKZF1Q13422 519 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 SCGB2B2Q4G0G5 96 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 RNASE10Q5GAN6 216 aaKnown RBP20.8■□□□□ 0.92
TTC3-225ENST00000540756 NHLRC3Q5JS37 347 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 HOGA1Q86XE5 327 aa20.8■□□□□ 0.92
TTC3-225ENST00000540756 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.79■□□□□ 0.92
TTC3-225ENST00000540756 TMEM210A6NLX4 147 aa20.79■□□□□ 0.92
TTC3-225ENST00000540756 A8MV72 311 aaPredicted RBP20.79■□□□□ 0.92
TTC3-225ENST00000540756 HNRNPCP07910 306 aaKnown RBP eCLIP20.79■□□□□ 0.922e-6■■□□□ 12
TTC3-225ENST00000540756 ANXA7P20073 488 aaKnown RBP20.79■□□□□ 0.92
TTC3-225ENST00000540756 FBXL19-AS1Q494R0 122 aa20.79■□□□□ 0.92
TTC3-225ENST00000540756 IDO2Q6ZQW0 420 aa20.79■□□□□ 0.92
TTC3-225ENST00000540756 GIMAP1Q8WWP7 306 aa20.79■□□□□ 0.92
TTC3-225ENST00000540756 CMSS1Q9BQ75 279 aaKnown RBP20.79■□□□□ 0.92
TTC3-225ENST00000540756 NRIP2Q9BQI9 281 aa20.79■□□□□ 0.92
TTC3-225ENST00000540756 NPDC1Q9NQX5 325 aaPredicted RBP20.79■□□□□ 0.92
TTC3-225ENST00000540756 TAAR3PQ9P1P4 343 aa20.79■□□□□ 0.92
TTC3-225ENST00000540756 ANKHD1Q8IWZ3 2542 aaKnown RBP20.79■□□□□ 0.92
TTC3-225ENST00000540756 A6NLC8 198 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 WNT9BO14905 357 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 PGA5P0DJD9 388 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 ARL6IP1Q15041 203 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 NUP37Q8NFH4 326 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 CA5BP1Q8WTZ4 195 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 RNASE6Q93091 150 aaKnown RBP20.78■□□□□ 0.92
TTC3-225ENST00000540756 MRGPRFQ96AM1 343 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 WDR13Q9H1Z4 485 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 ZNF442Q9H7R0 627 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 AMY2BP19961 511 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 RBMS2Q15434 407 aaKnown RBP20.78■□□□□ 0.92
TTC3-225ENST00000540756 OR13C8Q8NGS7 320 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 CHAC2Q8WUX2 184 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 ERRFI1Q9UJM3 462 aaPredicted RBP20.78■□□□□ 0.92
TTC3-225ENST00000540756 POLDIP2Q9Y2S7 368 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 ATP23Q9Y6H3 246 aa20.78■□□□□ 0.92
TTC3-225ENST00000540756 SPRY3O43610 288 aa20.77■□□□□ 0.92
TTC3-225ENST00000540756 CA11O75493 328 aa20.77■□□□□ 0.92
TTC3-225ENST00000540756 DHFRP00374 187 aa20.77■□□□□ 0.92
TTC3-225ENST00000540756 PPP3CBP16298 524 aa20.77■□□□□ 0.92
TTC3-225ENST00000540756 GNLYP22749 145 aa20.77■□□□□ 0.92
TTC3-225ENST00000540756 MRPL24Q96A35 216 aaKnown RBP20.77■□□□□ 0.92
TTC3-225ENST00000540756 HS3ST1O14792 307 aa20.77■□□□□ 0.91
TTC3-225ENST00000540756 PEX14O75381 377 aa20.77■□□□□ 0.91
TTC3-225ENST00000540756 CBX5P45973 191 aa20.77■□□□□ 0.91
TTC3-225ENST00000540756 RPS23P62266 143 aaKnown RBP20.77■□□□□ 0.91
TTC3-225ENST00000540756 WDR82Q6UXN9 313 aa20.77■□□□□ 0.91
TTC3-225ENST00000540756 AKAP14Q86UN6 197 aa20.77■□□□□ 0.91
TTC3-225ENST00000540756 NEUROG1Q92886 237 aa20.77■□□□□ 0.91
TTC3-225ENST00000540756 ELMOD3Q96FG2 381 aa20.77■□□□□ 0.91
TTC3-225ENST00000540756 CHST6Q9GZX3 395 aa20.77■□□□□ 0.91
TTC3-225ENST00000540756 GHITMQ9H3K2 345 aa20.77■□□□□ 0.91
TTC3-225ENST00000540756 TRAV24A0A0B4J272 114 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A10PA6NDY2 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A18PA6NE21 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A16PA6NEW6 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A20PA6NIJ5 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A8PA6NJQ4 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A7PA6NKC0 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A22PA8MWA6 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A12PA8MX19 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A5PA8MXJ8 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A23PA8MXZ1 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 SDCBPO00560 298 aaPredicted RBP20.76■□□□□ 0.91
TTC3-225ENST00000540756 HPXP02790 462 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FCGR3AP08637 254 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A15PP0C7V4 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A13PP0C7W8 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A14PP0C7W9 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 FAM90A24PP0C7X0 464 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 CBX3Q13185 183 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 MEF2DQ14814 521 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 ST3GAL2Q16842 350 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 PLPPR2Q96GM1 343 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 TLNRD1Q9H1K6 362 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 RCC2Q9P258 522 aaKnown RBP20.76■□□□□ 0.91
TTC3-225ENST00000540756 PLEKHA6Q9Y2H5 1048 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 LRBAP50851 2863 aa20.76■□□□□ 0.91
TTC3-225ENST00000540756 PLSCR5A0PG75 271 aa20.75■□□□□ 0.91
TTC3-225ENST00000540756 NXPH2O95156 264 aa20.75■□□□□ 0.91
TTC3-225ENST00000540756 MPV17LQ2QL34 196 aa20.75■□□□□ 0.91
TTC3-225ENST00000540756 C5orf24Q7Z6I8 188 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms